RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KLF6Q99612 283 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 C2orf49Q9BVC5 232 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 THAP2Q9H0W7 228 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 POLR1BQ9H9Y6 1135 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PARVAQ9NVD7 372 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 IL36AQ9UHA7 158 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PNMA8BQ9ULN7 279 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 FZD10Q9ULW2 581 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 FADS3Q9Y5Q0 445 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 ACTL7AQ9Y615 435 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 BZW2Q9Y6E2 419 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 UTP20O75691 2785 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 SDK2Q58EX2 2172 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CYSRT1A8MQ03 144 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 AP1G1O43747 822 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SRGAP2O75044 1071 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 LRCH4O75427 683 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 PCDH8O95206 1070 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CSF2P04141 144 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CYP1A2P05177 515 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 TPM3P06753 285 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 MYBL1P10243 752 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ALPPL2P10696 532 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 TCF4P15884 667 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 PSMA2P25787 234 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ABL2P42684 1182 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SERPINH1P50454 418 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 NEK3P51956 506 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ERVPABLB-1P60509 514 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 KRT83P78385 493 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CA9Q16790 459 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ISXQ2M1V0 245 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 C3orf38Q5JPI3 329 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ARHGAP40Q5TG30 622 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 KIAA1161Q6NSJ0 714 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZCCHC8Q6NZY4 707 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ALKBH5Q6P6C2 394 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 DCUN1D2Q6PH85 259 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 LRRC31Q6UY01 552 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF605Q86T29 641 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 PARGQ86W56 976 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CPNE8Q86YQ8 564 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 DRC7Q8IY82 874 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 KCNE4Q8WWG9 221 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 TBC1D31Q96DN5 1066 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 TRIM11Q96F44 468 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 WBP1Q96G27 269 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ATXN7L3BQ96GX2 97 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 BTBD6Q96KE9 485 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CCDC114Q96M63 670 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 CHP1Q99653 195 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SNRNP25Q9BV90 132 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 PACSIN1Q9BY11 444 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SLC17A9Q9BYT1 436 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZYG11BQ9C0D3 744 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 TCEAL2Q9H3H9 227 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 NOL6Q9H6R4 1146 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 USP29Q9HBJ7 922 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ABHD10Q9NUJ1 306 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMEM248Q9NWD8 314 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 GPATCH2LQ9NWQ4 482 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 DNAJC28Q9NX36 388 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 OR12D3Q9UGF7 316 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 GGT7Q9UJ14 662 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SATB2Q9UPW6 733 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ITM2BQ9Y287 266 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 ENTPD2Q9Y5L3 495 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 HS3ST3A1Q9Y663 406 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SCINQ9Y6U3 715 aa8.04□□□□□ -1.12
CDC42BPA-210ENST00000462553 SSU72P8A0A1W2PR75 194 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 ILVBLA1L0T0 632 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 EME2A4GXA9 379 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 CDRT15L2A8MXV6 281 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 AQP9O43315 295 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 PAK4O96013 591 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 RHOQP17081 205 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 IL1R2P27930 398 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 MIPP30301 263 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 OR1E1P30953 314 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 L1CAMP32004 1257 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 ACVRL1P37023 503 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 RABIFP47224 123 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 CCNHP51946 323 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 AIF1P55008 147 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 UCNP55089 124 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 ADKP55263 362 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 PFN3P60673 137 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 HNRNPKP61978 463 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 RPS21P63220 83 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 RHDQ02161 417 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 EIF2B5Q13144 721 aaKnown RBP8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 LY6DQ14210 128 aa8.03□□□□□ -1.12
CDC42BPA-210ENST00000462553 SLC18A3Q16572 532 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms