RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-221ENST00000462352 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 RAB7BQ96AH8 199 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 TADA1Q96BN2 335 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 DUSP15Q9H1R2 295 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-221ENST00000462352 GBA3Q9H227 469 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 FAM86C1Q9NVL1 165 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 UBP1Q9NZI7 540 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 PCDHB9Q9Y5E1 797 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 FADS3Q9Y5Q0 445 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 DMDP11532 3685 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 FANCMQ8IYD8 2048 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3DA0A087WVF3 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3IA0A087WXS9 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3EA0A087X179 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3KA0A087X1G2 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 GOLGA6L10A0A0M3HER8 536 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 A0A1W2PQ67 120 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3FA6NER0 549 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 FAM47DPA6NHR8 397 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 LRRC72A6NJI9 287 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 UPK3BL1B0FP48 263 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3LB9A6J9 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 UPK3BL2E5RIL1 263 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 KIF2AO00139 706 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 SPINT1O43278 529 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 AP1G1O43747 822 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PHF2O75151 1096 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PGLSO95336 258 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 CPP00450 1065 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PRLP01236 227 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 IFNB1P01574 187 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PRKCGP05129 697 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PDHA1P08559 390 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3HP0C7X1 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 ITIH2P19823 946 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 CA4P22748 312 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 XPAP23025 273 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PSMB4P28070 264 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PAFAH1B1P43034 410 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 POLR2LP62875 67 aaKnown RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 NUMA1Q14980 2115 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 P3H1Q32P28 736 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PMS2CLQ68D20 193 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3GQ6DHY5 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3CQ6IPX1 549 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TTC27Q6P3X3 843 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PRR23BQ6ZRT6 265 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 ARHGEF18Q6ZSZ5 1173 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TMEFF1Q8IYR6 380 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 TBC1D3Q8IZP1 549 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 DEFB119Q8N690 84 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 OR2T34Q8NGX1 318 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 MAGOHBQ96A72 148 aaKnown RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 OXNAD1Q96HP4 312 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 ZC3H10Q96K80 434 aaKnown RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 GORASP1Q9BQQ3 440 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PCDH9Q9HC56 1237 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PREBQ9HCU5 417 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 VPS45Q9NRW7 570 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 FAM153AQ9UHL3 310 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 RAPGEFL1Q9UHV5 662 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 CHKBQ9Y259 395 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 ITM2BQ9Y287 266 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 ANKRD36A6QL64 1941 aa11.88□□□□□ -0.51
CPNE1-221ENST00000462352 PRR23AA6NEV1 266 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 C10orf142B7Z368 130 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PDE2AO00408 941 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-221ENST00000462352 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
CPNE1-221ENST00000462352 AREL1O15033 823 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PMPCBO75439 489 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ANXA9O76027 345 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 RHOBTB1O94844 696 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ETS1P14921 441 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 COILP38432 576 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-221ENST00000462352 NBL1P41271 181 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 SUOXP51687 545 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PPP2CBP62714 309 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PPP2CAP67775 309 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 CDK18Q07002 472 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ELP6Q0PNE2 266 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 MPP3Q13368 585 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ELF2Q15723 593 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PCSK7Q16549 785 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PARP6Q2NL67 630 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 SPDYCQ5MJ68 293 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 CCDC137Q6PK04 289 aaKnown RBP11.87□□□□□ -0.51
CPNE1-221ENST00000462352 KDELC1Q6UW63 502 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 ARMCX6Q7L4S7 300 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 GSTA5Q7RTV2 222 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 KDELC2Q7Z4H8 507 aa11.87□□□□□ -0.51
CPNE1-221ENST00000462352 PRUNE1Q86TP1 453 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms