RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SMYD2Q9NRG4 433 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 THSD1Q9NS62 852 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SLC6A13Q9NSD5 602 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 RRP7BPQ9NSQ0 103 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ANKRD10Q9NXR5 420 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 NKIRAS2Q9NYR9 191 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 UTS2RQ9UKP6 389 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 RAP2CQ9Y3L5 183 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 SESN1Q9Y6P5 492 aa3.18□□□□□ -1.9
HDAC6-212ENST00000461608 COL11A2P13942 1736 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-212ENST00000461608 ZMYM2Q9UBW7 1377 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 FAM237BA0A1B0GVD1 139 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 A0A1W2PQF6 199 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TARSL2A2RTX5 802 aaKnown RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 LRRC3CA6NJW4 275 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 AGAP14A8MT82 685 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 E5RJQ4 531 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PTGES3LE9PB15 166 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 MDM4O15151 490 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 HCRTR2O43614 444 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 DAB1O75553 588 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 SLC25A12O75746 678 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CSPG5O95196 566 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 STARD3NLO95772 234 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TOP3BO95985 862 aaKnown RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PORP16435 677 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM11P17152 192 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 DDX5P17844 614 aaKnown RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CD72P21854 359 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 GPTP24298 496 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PTH2RP49190 550 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 EFNA5P52803 228 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 SNX16P57768 344 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 SRSF1Q07955 248 aaKnown RBP eCLIP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 FAM27E3Q08E93 113 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ST3GAL1Q11201 340 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 DRAP1Q14919 205 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ADIPOQQ15848 244 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 USP41Q3LFD5 358 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CFAP58Q5T655 872 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 UBAP2Q5T6F2 1119 aaKnown RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 KLHL35Q6PF15 583 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TSSK4Q6SA08 328 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 GLDNQ6ZMI3 551 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF66Q6ZN08 573 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TRILQ7L0X0 811 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 EPHX4Q8IUS5 362 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TEX11Q8IYF3 940 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 KIAA2013Q8IYS2 634 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CADM3Q8N126 398 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 OR8H2Q8N162 312 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 LRRC57Q8N9N7 239 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 BEST2Q8NFU1 509 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CMASQ8NFW8 434 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 KCNG4Q8TDN1 519 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ATOH1Q92858 354 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 JAKMIP2Q96AA8 810 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ARHGEF26Q96DR7 871 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 MMABQ96EY8 250 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CALML4Q96GE6 196 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM68Q96MH6 324 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 NEUROD6Q96NK8 337 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 SLITRK1Q96PX8 696 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 MXRA8Q9BRK3 442 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 C1QTNF1Q9BXJ1 281 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 TEX12Q9BXU0 123 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 B3GNT4Q9C0J1 378 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PRSS22Q9GZN4 317 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 R3HDMLQ9H3Y0 253 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PLEKHA4Q9H4M7 779 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 KLHL31Q9H511 634 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PDGFCQ9NRA1 345 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 PCDHB16Q9NRJ7 776 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 MORF4L1Q9UBU8 362 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ADD3Q9UEY8 706 aaKnown RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 MKLN1Q9UL63 735 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CORO1CQ9ULV4 474 aaPredicted RBP3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ADAM18Q9Y3Q7 739 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 CAPN7Q9Y6W3 813 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 ADGRF5Q8IZF2 1346 aa3.17□□□□□ -1.9
HDAC6-212ENST00000461608 A0A0U1RQF3 1178 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 hCG_1807616A0A1W2PRN6 198 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 WIPF3A6NGB9 483 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 HSPB2A8KAH6 182 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 NPIPB11E5RHQ5 1161 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 AHCYL1O43865 530 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 TLR2O60603 784 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 NDUFB4O95168 129 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 NR2F1P10589 423 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF182P17025 639 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 TBXAS1P24557 533 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 DCTDP32321 178 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 NNMTP40261 264 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 PBX3P40426 434 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 ALDH7A1P49419 539 aaKnown RBP3.16□□□□□ -1.9
HDAC6-212ENST00000461608 RASSF2P50749 326 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 CDH8P55286 799 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 PKP1Q13835 747 aa3.16□□□□□ -1.9
HDAC6-212ENST00000461608 FGFBP1Q14512 234 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms