RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 KDSRQ06136 332 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 CKAP4Q07065 602 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 IL10RBQ08334 325 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 LMAN2Q12907 356 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 IKZF1Q13422 519 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 DPYSQ14117 519 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 RFTN1Q14699 578 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 STARD3Q14849 445 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 UBXN2BQ14CS0 331 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PON2Q15165 354 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 TAZQ16635 292 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PLEKHG6Q3KR16 790 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 ALFQ53S48 1182 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 INO80DQ53TQ3 878 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 TMEM196Q5HYL7 178 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PITRM1Q5JRX3 1037 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 EOGTQ5NDL2 527 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PAPD7Q5XG87 772 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 MBLAC2Q68D91 279 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 SLC9A4Q6AI14 798 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 TXNRD3NBQ6F5E7 133 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 CCDC70Q6NSX1 233 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 DARS2Q6PI48 645 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 SYT10Q6XYQ8 523 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 BBS12Q6ZW61 710 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 CYP4V2Q6ZWL3 525 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 ARMCX6Q7L4S7 300 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 DSG4Q86SJ6 1040 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 ATG4DQ86TL0 474 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 NLRP14Q86W24 1093 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 SLC13A5Q86YT5 568 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 CDKL3Q8IVW4 592 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 ZNF683Q8IZ20 524 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PAF1Q8N7H5 531 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PLD5Q8N7P1 536 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.05□□□□□ -1.44
NUP98-208ENST00000461047 TERB1Q8NA31 727 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 DCAF4L2Q8NA75 395 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 ATP11CQ8NB49 1132 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 KDM1BQ8NB78 822 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 MNS1Q8NEH6 495 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PCDH19Q8TAB3 1148 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 RIN3Q8TB24 985 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 TFB1MQ8WVM0 346 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 ATRIPQ8WXE1 791 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 KRT35Q92764 455 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 ARHGEF2Q92974 986 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 TTC17Q96AE7 1141 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 FAF2Q96CS3 445 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PLPPR2Q96GM1 343 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 C16orf45Q96MC5 204 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 PRICKLE1Q96MT3 831 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 RUNDC3BQ96NL0 473 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 PPP1R2P1Q96PQ5 205 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 OSBPL9Q96SU4 736 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 FOXQ1Q9C009 403 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 KLHL11Q9NVR0 708 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 IPO11Q9UI26 975 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 MUTYHQ9UIF7 546 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 NDRG2Q9UN36 371 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 PACSIN2Q9UNF0 486 aaPredicted RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 SIT1Q9Y3P8 196 aa6.05□□□□□ -1.44
NUP98-208ENST00000461047 MKI67P46013 3256 aaKnown RBP6.05□□□□□ -1.44
NUP98-208ENST00000461047 TARSL2A2RTX5 802 aaKnown RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 GOLGA6CA6NDK9 693 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 GOLGA6BA6NDN3 693 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 C3orf70A6NLC5 250 aaPredicted RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 I6L893 689 aaPredicted RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 KRIT1O00522 736 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 MATN3O15232 486 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 URI1O94763 535 aaPredicted RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 ALDH1A2O94788 518 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 ATP1A1P05023 1023 aaKnown RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 CD48P09326 243 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 GOLGA6DP0CG33 693 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 KRT10P13645 584 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 CA4P22748 312 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 IL4RP24394 825 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 NFKBIAP25963 317 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 HLA-FP30511 346 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 NTSR1P30989 418 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 CD70P32970 193 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 NTF4P34130 210 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 OPRD1P41143 372 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 GARSP41250 739 aaKnown RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 SLC6A11P48066 632 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 SOX9P48436 509 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 MARCKSL1P49006 195 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 EIF3EP60228 445 aaKnown RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 SNRPD1P62314 119 aaKnown RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 AP1B1Q10567 949 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 SERINC3Q13530 473 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 PRPSAP1Q14558 356 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 ZNF235Q14590 738 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 INPP5AQ14642 412 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 GRM3Q14832 879 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 CCNG2Q16589 344 aa6.04□□□□□ -1.44
NUP98-208ENST00000461047 FNDC3BQ53EP0 1204 aaKnown RBP6.04□□□□□ -1.44
NUP98-208ENST00000461047 WIPI1Q5MNZ9 446 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms