RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 HS1BP3Q53T59 392 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TFDP3Q5H9I0 405 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MARC1Q5VT66 337 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MFSD7Q6UXD7 560 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ARHGAP36Q6ZRI8 547 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ERN2Q76MJ5 926 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PEX26Q7Z412 305 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GALNT15Q8N3T1 639 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 UBL4BQ8N7F7 174 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PNPLA1Q8N8W4 532 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NETO2Q8NC67 525 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GRIN3AQ8TCU5 1115 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GATA6Q92908 595 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KLHDC7BQ96G42 594 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 HDAC8Q9BY41 377 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GOLPH3Q9H4A6 298 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 EBF2Q9HAK2 575 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZMIZ1Q9ULJ6 1067 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GUCA1BQ9UMX6 200 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 WASF2Q9Y6W5 498 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 A0A1W2PR77 199 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 GRID2IPA4D2P6 1211 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MFSD11O43934 449 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KRT37O76014 449 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PCDH8O95206 1070 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ITGB7P26010 798 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CTNNA2P26232 953 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 AKT2P31751 481 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CDKN2BP42772 138 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NR2C2P49116 596 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RWDD2BP57060 319 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NXPH1P58417 271 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCZ1BP86790 482 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCZ1P86791 482 aaPredicted RBP13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZNF235Q14590 738 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZNF805Q5CZA5 627 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ATXN7L2Q5T6C5 722 aaPredicted RBP13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SLC9A4Q6AI14 798 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FBXL19Q6PCT2 694 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SPOCD1Q6ZMY3 1216 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZNF662Q6ZS27 426 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SRLQ86TD4 932 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TP53INP2Q8IXH6 220 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LRRC57Q8N9N7 239 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCNYQ8ND76 341 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 BAHD1Q8TBE0 780 aaPredicted RBP13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FAM174AQ8TBP5 190 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TSGA13Q96PP4 275 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LHX3Q9UBR4 397 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TRIM10Q9UDY6 481 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HEY1Q9Y5J3 304 aa13.39□□□□□ -0.27
RAB11FIP3-207ENST00000461009 A0A1W2PQU0 124 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PPP1R12AO14974 1030 aaPredicted RBP13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MATN3O15232 486 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SLC31A1O15431 190 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LDOC1O95751 146 aaPredicted RBP13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 WNT1P04628 370 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ATXN1LP0C7T5 689 aaKnown RBP13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 MMP13P45452 471 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 SCNN1BP51168 640 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 NEK3P51956 506 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 METAP1P53582 386 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 GBE1Q04446 702 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PDK1Q15118 436 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TAZQ16635 292 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PRAMEF14Q5SWL7 426 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PIP5KL1Q5T9C9 394 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 KAZNQ674X7 775 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HORMAD1Q86X24 394 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PLD5Q8N7P1 536 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TSEN2Q8NCE0 465 aaKnown RBP13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 OR6K2Q8NGY2 324 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HCAR2Q8TDS4 363 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 FATE1Q969F0 183 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 RAB7BQ96AH8 199 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 ZNF641Q96N77 438 aaPredicted RBP13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 TUBGCP5Q96RT8 1024 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 DTLQ9NZJ0 730 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 AMACRQ9UHK6 382 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 BTBD3Q9Y2F9 522 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 EFR3BQ9Y2G0 817 aa13.38□□□□□ -0.27
RAB11FIP3-207ENST00000461009 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.37□□□□□ -0.27
RAB11FIP3-207ENST00000461009 C10orf142B7Z368 130 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms