RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 PPFIA1Q13136 1202 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 EFR3AQ14156 821 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ANKRD1Q15327 319 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 INO80DQ53TQ3 878 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 CRELD2Q6UXH1 353 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 TRILQ7L0X0 811 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 MEPCEQ7L2J0 689 aaKnown RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ZDHHC23Q8IYP9 409 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 FBXL14Q8N1E6 418 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 GHDCQ8N2G8 530 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 OR4N2Q8NGD1 307 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ADAMTS14Q8WXS8 1223 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 STAMQ92783 540 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ZNF333Q96JL9 665 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 HIPK2Q9H2X6 1198 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 TTC12Q9H892 705 aaPredicted RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 NOD2Q9HC29 1040 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 WDR6Q9NNW5 1121 aaKnown RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ATP8A2Q9NTI2 1148 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 MYO6Q9UM54 1294 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 PTPRMP28827 1452 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 SETD1AO15047 1707 aaKnown RBP3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ITSN1Q15811 1721 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 IL16Q14005 1332 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 CNTNAP2Q9UHC6 1331 aa3.89□□□□□ -1.79
SSX2IP-204ENST00000459708 ALKQ9UM73 1620 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 EDC4Q6P2E9 1401 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 SIGLEC1Q9BZZ2 1709 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 MS4A18H0YCH9 400 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 GTPBP1O00178 669 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 EIF3FO00303 357 aaPredicted RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 SERPINC1P01008 464 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 IL1AP01583 271 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 GNLYP22749 145 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 CCKARP32238 428 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 DCTDP32321 178 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ABATP80404 500 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 SLC18A2Q05940 514 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 Q0VFX4 171 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ERV3-1Q14264 604 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 KLHL22Q53GT1 634 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 DNTTIP2Q5QJE6 756 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 FNBP1LQ5T0N5 605 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 UBAP2Q5T6F2 1119 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 MAP3K21Q5TCX8 1036 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 OTUD1Q5VV17 481 aaPredicted RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ATG9BQ674R7 924 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ZNF367Q7RTV3 350 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 LRRTM4Q86VH4 590 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 CPOQ8IVL8 374 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 LSM14AQ8ND56 463 aaKnown RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 RASSF8Q8NHQ8 419 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ADAMTS15Q8TE58 950 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 SLC35F5Q8WV83 523 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 TRIM63Q969Q1 353 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 TMEM18Q96B42 140 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ZSCAN31Q96LW9 406 aaPredicted RBP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 REEP2Q9BRK0 252 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 NPFFR1Q9GZQ6 430 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 PLK2Q9NYY3 685 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 CLDN16Q9Y5I7 305 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 DGKBQ9Y6T7 804 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 ABCC6O95255 1503 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 PNPLA6Q8IY17 1366 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 TNRQ92752 1358 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 DISP3Q9P2K9 1392 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 TMEM2Q9UHN6 1383 aa3.88□□□□□ -1.79
SSX2IP-204ENST00000459708 PPIP5K1Q6PFW1 1433 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 UBR1Q8IWV7 1749 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 OR6C75A6NL08 312 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 PER2O15055 1255 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 MMP3P08254 477 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 ACAA1P09110 424 aaPredicted RBP3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 CTPS1P17812 591 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 TKTP29401 623 aaKnown RBP3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 PCYT1AP49585 367 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 CCR5P51681 352 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 ARSFP54793 590 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 DHX8Q14562 1220 aaKnown RBP3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 WDR43Q15061 677 aaKnown RBP eCLIP3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 SLC18A3Q16572 532 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 SLC4A8Q2Y0W8 1093 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 ZNF585BQ52M93 769 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 RUSC1-AS1Q66K80 236 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 ANKRD18AQ8IVF6 992 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 WDR63Q8IWG1 891 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 MIGA1Q8NAN2 632 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 USP38Q8NB14 1042 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 NEXN-AS1Q8NBZ9 246 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 DNAAF1Q8NEP3 725 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 GPT2Q8TD30 523 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 RAB40AQ8WXH6 277 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 HERVK_113Q902F9 699 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 NEUROG1Q92886 237 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 GCC1Q96CN9 775 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 THOC3Q96J01 351 aaKnown RBP3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 ZPBPQ9BS86 351 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 TMEM204Q9BSN7 226 aa3.87□□□□□ -1.79
SSX2IP-204ENST00000459708 PHF7Q9BWX1 381 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms