RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SERINC3Q13530 473 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 LRRC14Q15048 493 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 KLHL40Q2TBA0 621 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 TMEM52BQ4KMG9 183 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 ARHGAP40Q5TG30 622 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 LEKR1Q6ZMV7 388 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 RBFAQ8N0V3 343 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 ATL2Q8NHH9 583 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 EPAS1Q99814 870 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 LRRC61Q9BV99 259 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 VPS16Q9H269 839 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 NOL6Q9H6R4 1146 aaKnown RBP21.77■■□□□ 1.08
CPNE1-220ENST00000458038 FAM207AQ9NSI2 230 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-220ENST00000458038 DOLKQ9UPQ8 538 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 PIEZO2Q9H5I5 2752 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 UNC13CQ8NB66 2214 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 CDRT15L2A8MXV6 281 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 TMX2-CTNND1H3BSU7 103 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 YY2O15391 372 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 TSHRP16473 764 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 DESP17661 470 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 HTR1BP28222 390 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 HTR7P34969 479 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 C1orf61Q13536 156 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 SPIDRQ14159 915 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 SYCP1Q15431 976 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 PERM1Q5SV97 790 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 WDR59Q6PJI9 974 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 PCSK4Q6UW60 755 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 PHLDB2Q86SQ0 1253 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 UMODL1-AS1Q8N2C9 162 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 TP53I13Q8NBR0 393 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-220ENST00000458038 OR6C4Q8NGE1 309 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 MAGEB5Q9BZ81 275 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 TCEAL2Q9H3H9 227 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-220ENST00000458038 CPNE5Q9HCH3 593 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 NLRC4Q9NPP4 1024 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 AHCTF1Q8WYP5 2266 aa21.76■■□□□ 1.07
CPNE1-220ENST00000458038 LRRK1Q38SD2 2015 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CCDC187A0A096LP49 1063 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 RASA4BC9J798 803 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 FGF10O15520 208 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-220ENST00000458038 RASA4O43374 803 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CTSEP14091 401 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 ZNF143P52747 638 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-220ENST00000458038 HK3P52790 923 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 C1QBPQ07021 282 aaKnown RBP21.75■■□□□ 1.07
CPNE1-220ENST00000458038 AGERQ15109 404 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 KRT31Q15323 416 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CLEC16AQ2KHT3 1053 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CDKAL1Q5VV42 579 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CLEC14AQ86T13 490 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 DNAAF5Q86Y56 855 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 PRR11Q96HE9 360 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-220ENST00000458038 ZNF641Q96N77 438 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-220ENST00000458038 NCAPGQ9BPX3 1015 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CCDC3Q9BQI4 270 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 CLPBQ9H078 707 aa21.75■■□□□ 1.07
CPNE1-220ENST00000458038 MBNL1Q9NR56 388 aaKnown RBP21.75■■□□□ 1.07
CPNE1-220ENST00000458038 NTN3O00634 580 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-220ENST00000458038 PLA2G2AP14555 144 aa21.74■■□□□ 1.07
CPNE1-220ENST00000458038 EIF3IQ13347 325 aaKnown RBP21.74■■□□□ 1.07
CPNE1-220ENST00000458038 SCYL2Q6P3W7 929 aa21.74■■□□□ 1.07
CPNE1-220ENST00000458038 ARL10Q8N8L6 244 aa21.74■■□□□ 1.07
CPNE1-220ENST00000458038 HMCESQ96FZ2 354 aa21.74■■□□□ 1.07
CPNE1-220ENST00000458038 LIN37Q96GY3 246 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-220ENST00000458038 PCDHB18PQ96TA0 734 aa21.74■■□□□ 1.07
CPNE1-220ENST00000458038 CNPY3Q9BT09 278 aa21.74■■□□□ 1.07
CPNE1-220ENST00000458038 WRAP53Q9BUR4 548 aaKnown RBP21.74■■□□□ 1.07
CPNE1-220ENST00000458038 PNMA8BQ9ULN7 279 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-220ENST00000458038 A0A1W2PNU3 283 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-220ENST00000458038 TSPAN11A1L157 253 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 RASGRP1O95267 797 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 GJB6O95452 261 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 ITGA2BP08514 1039 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 IRF4Q15306 451 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 UGP2Q16851 508 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 LRRC73Q5JTD7 316 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 ERAP2Q6P179 960 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 BRAT1Q6PJG6 821 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 GKN2Q86XP6 184 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 PYROXD2Q8N2H3 581 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 ANKRD20A12PQ8NF67 263 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 TUBGCP5Q96RT8 1024 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 EDEM3Q9BZQ6 932 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 KLC2Q9H0B6 622 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 SUV39H2Q9H5I1 410 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 UBA2Q9UBT2 640 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-220ENST00000458038 FZD10Q9ULW2 581 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 SIK3Q9Y2K2 1263 aa21.73■■□□□ 1.07
CPNE1-220ENST00000458038 CFAP69A5D8W1 941 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 CREB3O43889 395 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 KLK7P49862 253 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 NFATC4Q14934 902 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 WSCD2Q2TBF2 565 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 CFAP58Q5T655 872 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 DNAJC24Q6P3W2 148 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 CRTC1Q6UUV9 634 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 MON1BQ7L1V2 547 aa21.72■■□□□ 1.07
CPNE1-220ENST00000458038 HID1Q8IV36 788 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms