RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 VCPIP1Q96JH7 1222 aa15.93■□□□□ 0.14
CHCHD3-204ENST00000457942 APOLD1Q96LR9 279 aa15.93■□□□□ 0.14
CHCHD3-204ENST00000457942 LENG8Q96PV6 779 aaPredicted RBP15.93■□□□□ 0.14
CHCHD3-204ENST00000457942 BPIFA3Q9BQP9 254 aa15.93■□□□□ 0.14
CHCHD3-204ENST00000457942 WRAP53Q9BUR4 548 aaKnown RBP15.93■□□□□ 0.14
CHCHD3-204ENST00000457942 PCSK1NQ9UHG2 260 aa15.93■□□□□ 0.14
CHCHD3-204ENST00000457942 ANKRD36A6QL64 1941 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 ARHGAP42A6NI28 874 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 WASH4PA8MWX3 477 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 SCAMP1O15126 338 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 INSIG1O15503 277 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 PRPSAP2O60256 369 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 USP12O75317 370 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 RNF8O76064 485 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 CSF2P04141 144 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 CKMT1AP12532 417 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 DUSP3P51452 185 aaPredicted RBP15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 MAMLD1Q13495 774 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 PTK2BQ14289 1009 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 PPP6R3Q5H9R7 873 aaPredicted RBP15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 DNAAF5Q86Y56 855 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 UMODL1-AS1Q8N2C9 162 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 ZNF653Q96CK0 615 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 KLF6Q99612 283 aaPredicted RBP15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 ABCG4Q9H172 646 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 HAUS4Q9H6D7 363 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 SP110Q9HB58 689 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 GPR27Q9NS67 375 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 LHX3Q9UBR4 397 aa15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 CNOT8Q9UFF9 292 aaKnown RBP15.92■□□□□ 0.14
CHCHD3-204ENST00000457942 CAPN8A6NHC0 703 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 B8ZZF3 427 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 K7ESM1 405 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 DFFAO00273 331 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 AREL1O15033 823 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 SPINT1O43278 529 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 AQP9O43315 295 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 SERPINC1P01008 464 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 C6P13671 934 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 IGFALSP35858 605 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 ZNF165P49910 485 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 NDST2P52849 883 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 KCNC4Q03721 635 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 KLHL30Q0D2K2 578 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 ELP6Q0PNE2 266 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 KLHL40Q2TBA0 621 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 DEFB133Q30KQ1 61 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 ERMARDQ5T6L9 678 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 PLEKHA7Q6IQ23 1121 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 BTN2A2Q8WVV5 523 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 ASB12Q8WXK4 309 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 RFFLQ8WZ73 363 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 HIC2Q96JB3 615 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 IL12RB2Q99665 862 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 SNRNP25Q9BV90 132 aaKnown RBP15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 MYO1AQ9UBC5 1043 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 DKK3Q9UBP4 350 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 APOBEC3BQ9UH17 382 aaKnown RBP15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 SCINQ9Y6U3 715 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 PIEZO2Q9H5I5 2752 aa15.91■□□□□ 0.14
CHCHD3-204ENST00000457942 EIF3CLB5ME19 914 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 J3KR12 359 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 CSO75390 466 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 PALMO75781 387 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 FTLP02792 175 aaPredicted RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 TIMP2P16035 220 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 ITIH2P19823 946 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 PAPOLAP51003 745 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 PFN3P60673 137 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 TPM4P67936 248 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 GRM3Q14832 879 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 CYTH1Q15438 398 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 CA9Q16790 459 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 TDRD12Q587J7 1177 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 C3orf38Q5JPI3 329 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 TPRG1LQ5T0D9 272 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 ZCCHC8Q6NZY4 707 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 RFX8Q6ZV50 586 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 ZNF571Q7Z3V5 609 aaPredicted RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 RBFAQ8N0V3 343 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 IFI44Q8TCB0 444 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 MAPK15Q8TD08 544 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 TRIM11Q96F44 468 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 ZNF578Q96N58 590 aaPredicted RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 PEBP4Q96S96 227 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 KCTD15Q96SI1 283 aaPredicted RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 EIF3CQ99613 913 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 SYT11Q9BT88 431 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 CINPQ9BW66 212 aaPredicted RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 CPEB1Q9BZB8 566 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 SLC13A1Q9BZW2 595 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 LRRC19Q9H756 370 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 USP29Q9HBJ7 922 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 SPASTQ9UBP0 616 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 COQ6Q9Y2Z9 468 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 MFHAS1Q9Y4C4 1052 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 LRRK1Q38SD2 2015 aa15.9■□□□□ 0.14
CHCHD3-204ENST00000457942 A0A1W2PQC6 194 aa15.89■□□□□ 0.13
CHCHD3-204ENST00000457942 CPED1A4D0V7 1026 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms