RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ACSS3Q9H6R3 686 aa8.82□□□□□ -1
RIF1-208ENST00000457745 ZFP14Q9HCL3 533 aa8.82□□□□□ -1
RIF1-208ENST00000457745 VPS45Q9NRW7 570 aa8.82□□□□□ -1
RIF1-208ENST00000457745 TREX1Q9NSU2 369 aa8.82□□□□□ -1
RIF1-208ENST00000457745 MOCS1Q9NZB8 636 aa8.82□□□□□ -1
RIF1-208ENST00000457745 TBC1D14Q9P2M4 693 aa8.82□□□□□ -1
RIF1-208ENST00000457745 CD207Q9UJ71 328 aa8.82□□□□□ -1
RIF1-208ENST00000457745 SOX13Q9UN79 622 aa8.82□□□□□ -1
RIF1-208ENST00000457745 ERVW-1Q9UQF0 538 aa8.82□□□□□ -1
RIF1-208ENST00000457745 TCAF1Q9Y4C2 921 aa8.82□□□□□ -1
RIF1-208ENST00000457745 A0A087WUV0 522 aaPredicted RBP8.81□□□□□ -1
RIF1-208ENST00000457745 A0A1W2PPM1 405 aa8.81□□□□□ -1
RIF1-208ENST00000457745 SDR42E2A6NKP2 422 aa8.81□□□□□ -1
RIF1-208ENST00000457745 WASH3PC4AMC7 463 aa8.81□□□□□ -1
RIF1-208ENST00000457745 TRAFD1O14545 582 aaPredicted RBP8.81□□□□□ -1
RIF1-208ENST00000457745 POLR3GO15318 223 aaPredicted RBP8.81□□□□□ -1
RIF1-208ENST00000457745 GPR39O43194 453 aa8.81□□□□□ -1
RIF1-208ENST00000457745 MBTPS2O43462 519 aa8.81□□□□□ -1
RIF1-208ENST00000457745 LDB2O43679 373 aa8.81□□□□□ -1
RIF1-208ENST00000457745 ANXA9O76027 345 aa8.81□□□□□ -1
RIF1-208ENST00000457745 CYBBP04839 570 aa8.81□□□□□ -1
RIF1-208ENST00000457745 CTSLP07711 333 aa8.81□□□□□ -1
RIF1-208ENST00000457745 ALPIP09923 528 aa8.81□□□□□ -1
RIF1-208ENST00000457745 HLA-EP13747 358 aa8.81□□□□□ -1
RIF1-208ENST00000457745 CTPS1P17812 591 aa8.81□□□□□ -1
RIF1-208ENST00000457745 KCNA5P22460 613 aa8.81□□□□□ -1
RIF1-208ENST00000457745 PRKCHP24723 683 aa8.81□□□□□ -1
RIF1-208ENST00000457745 GDI1P31150 447 aa8.81□□□□□ -1
RIF1-208ENST00000457745 GJA4P35212 333 aa8.81□□□□□ -1
RIF1-208ENST00000457745 DGKGP49619 791 aa8.81□□□□□ -1
RIF1-208ENST00000457745 CDK16Q00536 496 aa8.81□□□□□ -1
RIF1-208ENST00000457745 MPP3Q13368 585 aa8.81□□□□□ -1
RIF1-208ENST00000457745 BMPR2Q13873 1038 aa8.81□□□□□ -1
RIF1-208ENST00000457745 SEPT6Q14141 434 aa8.81□□□□□ -1
RIF1-208ENST00000457745 SEMA3AQ14563 771 aa8.81□□□□□ -1
RIF1-208ENST00000457745 TMED2Q15363 201 aa8.81□□□□□ -1
RIF1-208ENST00000457745 DNAJC21Q5F1R6 531 aaKnown RBP8.81□□□□□ -1
RIF1-208ENST00000457745 ZNF789Q5FWF6 425 aa8.81□□□□□ -1
RIF1-208ENST00000457745 ELMSAN1Q6PJG2 1045 aa8.81□□□□□ -1
RIF1-208ENST00000457745 DPY19L3Q6ZPD9 716 aa8.81□□□□□ -1
RIF1-208ENST00000457745 RFLNAQ6ZTI6 216 aa8.81□□□□□ -1
RIF1-208ENST00000457745 TMEM135Q86UB9 458 aa8.81□□□□□ -1
RIF1-208ENST00000457745 MFSD6LQ8IWD5 586 aa8.81□□□□□ -1
RIF1-208ENST00000457745 LPCAT1Q8NF37 534 aa8.81□□□□□ -1
RIF1-208ENST00000457745 MDGA1Q8NFP4 955 aa8.81□□□□□ -1
RIF1-208ENST00000457745 OR13C4Q8NGS5 318 aa8.81□□□□□ -1
RIF1-208ENST00000457745 OR13J1Q8NGT2 312 aa8.81□□□□□ -1
RIF1-208ENST00000457745 PIH1D2Q8WWB5 315 aa8.81□□□□□ -1
RIF1-208ENST00000457745 PPM1EQ8WY54 764 aa8.81□□□□□ -1
RIF1-208ENST00000457745 PPP2R3CQ969Q6 453 aa8.81□□□□□ -1
RIF1-208ENST00000457745 OTUB2Q96DC9 234 aa8.81□□□□□ -1
RIF1-208ENST00000457745 FEM1CQ96JP0 617 aa8.81□□□□□ -1
RIF1-208ENST00000457745 PAFAH2Q99487 392 aa8.81□□□□□ -1
RIF1-208ENST00000457745 AGAP2Q99490 1192 aa8.81□□□□□ -1
RIF1-208ENST00000457745 KLF6Q99612 283 aaPredicted RBP8.81□□□□□ -1
RIF1-208ENST00000457745 KIFC1Q9BW19 673 aa8.81□□□□□ -1
RIF1-208ENST00000457745 C12orf65Q9H3J6 166 aaKnown RBP8.81□□□□□ -1
RIF1-208ENST00000457745 ARNT2Q9HBZ2 717 aa8.81□□□□□ -1
RIF1-208ENST00000457745 POLR3BQ9NW08 1133 aaPredicted RBP8.81□□□□□ -1
RIF1-208ENST00000457745 OBP2AQ9NY56 170 aa8.81□□□□□ -1
RIF1-208ENST00000457745 TBK1Q9UHD2 729 aa8.81□□□□□ -1
RIF1-208ENST00000457745 LGALS13Q9UHV8 139 aa8.81□□□□□ -1
RIF1-208ENST00000457745 NOVA2Q9UNW9 492 aaKnown RBP8.81□□□□□ -1
RIF1-208ENST00000457745 HS3ST2Q9Y278 367 aa8.81□□□□□ -1
RIF1-208ENST00000457745 RAI2Q9Y5P3 530 aa8.81□□□□□ -1
RIF1-208ENST00000457745 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
RIF1-208ENST00000457745 MYO10Q9HD67 2058 aa8.81□□□□□ -1
RIF1-208ENST00000457745 PLXNB3Q9ULL4 1909 aa8.8□□□□□ -1
RIF1-208ENST00000457745 LRRK1Q38SD2 2015 aa8.8□□□□□ -1
RIF1-208ENST00000457745 TMEM265A0A087WTH1 108 aa8.8□□□□□ -1
RIF1-208ENST00000457745 EXOC1LA0A1B0GW35 172 aa8.8□□□□□ -1
RIF1-208ENST00000457745 A0A1W2PPC1 479 aa8.8□□□□□ -1
RIF1-208ENST00000457745 TYW5A2RUC4 315 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 ERI2A8K979 691 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 PLK4O00444 970 aa8.8□□□□□ -1
RIF1-208ENST00000457745 RASGRF2O14827 1237 aa8.8□□□□□ -1
RIF1-208ENST00000457745 SPINT1O43278 529 aa8.8□□□□□ -1
RIF1-208ENST00000457745 NARSO43776 548 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 BNIP3LO60238 219 aa8.8□□□□□ -1
RIF1-208ENST00000457745 TCEA3O75764 348 aa8.8□□□□□ -1
RIF1-208ENST00000457745 ALDH1A2O94788 518 aa8.8□□□□□ -1
RIF1-208ENST00000457745 TOP3BO95985 862 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 ASGR2P07307 311 aa8.8□□□□□ -1
RIF1-208ENST00000457745 PGAM1P18669 254 aa8.8□□□□□ -1
RIF1-208ENST00000457745 GABRB3P28472 473 aa8.8□□□□□ -1
RIF1-208ENST00000457745 MTHFRP42898 656 aa8.8□□□□□ -1
RIF1-208ENST00000457745 ARCN1P48444 511 aaKnown RBP8.8□□□□□ -1
RIF1-208ENST00000457745 TMPRSS15P98073 1019 aa8.8□□□□□ -1
RIF1-208ENST00000457745 MPP1Q00013 466 aa8.8□□□□□ -1
RIF1-208ENST00000457745 CDK18Q07002 472 aa8.8□□□□□ -1
RIF1-208ENST00000457745 CDH17Q12864 832 aa8.8□□□□□ -1
RIF1-208ENST00000457745 RUNX3Q13761 415 aa8.8□□□□□ -1
RIF1-208ENST00000457745 PRPSAP1Q14558 356 aa8.8□□□□□ -1
RIF1-208ENST00000457745 RFTN1Q14699 578 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 DLG2Q15700 870 aa8.8□□□□□ -1
RIF1-208ENST00000457745 CDKN3Q16667 212 aa8.8□□□□□ -1
RIF1-208ENST00000457745 INO80DQ53TQ3 878 aaPredicted RBP8.8□□□□□ -1
RIF1-208ENST00000457745 NAPEPLDQ6IQ20 393 aa8.8□□□□□ -1
RIF1-208ENST00000457745 CASC4Q6P4E1 433 aa8.8□□□□□ -1
RIF1-208ENST00000457745 PKN3Q6P5Z2 889 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms