RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SLC25A52Q3SY17 297 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 ATXN7L2Q5T6C5 722 aaPredicted RBP23.49■■□□□ 1.35
PTPRA-208ENST00000455631 PHF19Q5T6S3 580 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 GDPD4Q6W3E5 623 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 LEKR1Q6ZMV7 388 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 NYAP1Q6ZVC0 841 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 VOPP1Q96AW1 172 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 HAPLN3Q96S86 360 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 ADNPQ9H2P0 1102 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 KLQ9UEF7 1012 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 COQ6Q9Y2Z9 468 aa23.49■■□□□ 1.35
PTPRA-208ENST00000455631 TMEM110-MUSTN1A8MSY1 372 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 MARSP56192 900 aaKnown RBP23.48■■□□□ 1.35
PTPRA-208ENST00000455631 SRP54P61011 504 aaKnown RBP23.48■■□□□ 1.35
PTPRA-208ENST00000455631 PTK2Q05397 1052 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 LRRC14Q15048 493 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 MYLK3Q32MK0 819 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 FAM102AQ5T9C2 384 aaPredicted RBP23.48■■□□□ 1.35
PTPRA-208ENST00000455631 BORAQ6PGQ7 559 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 SPRED1Q7Z699 444 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 GPR156Q8NFN8 814 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 SHC3Q92529 594 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 HOOK1Q9UJC3 728 aaKnown RBP23.48■■□□□ 1.35
PTPRA-208ENST00000455631 APPL1Q9UKG1 709 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 MAN1B1Q9UKM7 699 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 LRRK1Q38SD2 2015 aa23.48■■□□□ 1.35
PTPRA-208ENST00000455631 CXorf51AA0A1B0GTR3 108 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 GLB1P16278 677 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 STX17P56962 302 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 MAP9Q49MG5 647 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 CERCAMQ5T4B2 595 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 TMEM164Q5U3C3 297 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 FAM131BQ86XD5 332 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 TMEM51Q9NW97 253 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 PPARGC1AQ9UBK2 798 aaKnown RBP23.47■■□□□ 1.35
PTPRA-208ENST00000455631 APEX2Q9UBZ4 518 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 HPCAL4Q9UM19 191 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 OR1A2Q9Y585 309 aa23.47■■□□□ 1.35
PTPRA-208ENST00000455631 FAM170AA1A519 330 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 ANKRD36A6QL64 1941 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 SLC9A1P19634 815 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 CR2P20023 1033 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 WSCD2Q2TBF2 565 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 SDK2Q58EX2 2172 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 TMPRSS9Q7Z410 1059 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 SLITRK4Q8IW52 837 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 ATL2Q8NHH9 583 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 PDXPQ96GD0 296 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 GDAP1L1Q96MZ0 367 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 RBM15Q96T37 977 aaKnown RBP eCLIP23.46■■□□□ 1.35
PTPRA-208ENST00000455631 NDFIP2Q9NV92 336 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 DNAI1Q9UI46 699 aa23.46■■□□□ 1.35
PTPRA-208ENST00000455631 B4DGG1 531 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 STMND1H3BQB6 276 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 XPAP23025 273 aaPredicted RBP23.45■■□□□ 1.34
PTPRA-208ENST00000455631 FLT3P36888 993 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 ATP1A2P50993 1020 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 POLE2P56282 527 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 KCNAB2Q13303 367 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 ARHGEF7Q14155 803 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 INPP5AQ14642 412 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 KCTD16Q68DU8 428 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 RWDD4Q6NW29 188 aaKnown RBP23.45■■□□□ 1.34
PTPRA-208ENST00000455631 FOXR2Q6PJQ5 311 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 SLC47A2Q86VL8 602 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 SFTPA2Q8IWL1 248 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 WDR92Q96MX6 357 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 APOOQ9BUR5 198 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 SLC12A9Q9BXP2 914 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 SEMA6CQ9H3T2 930 aa23.45■■□□□ 1.34
PTPRA-208ENST00000455631 AKAP7Q9P0M2 348 aaPredicted RBP23.45■■□□□ 1.34
PTPRA-208ENST00000455631 GOLGA6L4A6NEF3 574 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 PPP1R3GB7ZBB8 358 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.44■■□□□ 1.34
PTPRA-208ENST00000455631 TNFP01375 233 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 PCCBP05166 539 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 PNLIPP16233 465 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 FOXK1P85037 733 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 RAD51Q06609 339 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 C16orf72Q14CZ0 275 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 IGFBP7Q16270 282 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 TAF8Q7Z7C8 310 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 FAM46DQ8NEK8 389 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 CFAP57Q96MR6 1250 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 LRIT1Q9P2V4 623 aa23.44■■□□□ 1.34
PTPRA-208ENST00000455631 FLNCQ14315 2725 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 TMCC1O94876 653 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 TIMP2P16035 220 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 SCNN1AP37088 669 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 MAPKAPK2P49137 400 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 ELP6Q0PNE2 266 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 TMEM52BQ4KMG9 183 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 C14orf28Q4W4Y0 310 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 TRNP1Q6NT89 227 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 ZNF354CQ86Y25 554 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 C18orf8Q96DM3 657 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 PDCL3Q9H2J4 239 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 RDH14Q9HBH5 336 aa23.43■■□□□ 1.34
PTPRA-208ENST00000455631 RELNP78509 3460 aa23.42■■□□□ 1.34
PTPRA-208ENST00000455631 GOLGA8SH3BPF8 625 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms