RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 JOSD2Q8TAC2 188 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 GPT2Q8TD30 523 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 FAM172AQ8WUF8 416 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 SLC20A1Q8WUM9 679 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 EPAS1Q99814 870 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 RAB6CQ9H0N0 254 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 CPNE5Q9HCH3 593 aa11.02□□□□□ -0.65
USP1-204ENST00000452143 SAMSN1Q9NSI8 373 aaKnown RBP11.02□□□□□ -0.65
USP1-204ENST00000452143 BOD1L1Q8NFC6 3051 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 CCDC187A0A096LP49 1063 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 A0A1W2PNU3 283 aaPredicted RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 TMEM110-MUSTN1A8MSY1 372 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 MMP20O60882 483 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 CALB1P05937 261 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 ITGA2BP08514 1039 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 ALPIP09923 528 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 UNGP13051 313 aaPredicted RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 TSHRP16473 764 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 CHRNB2P17787 502 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 GPD1P21695 349 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 HTR1BP28222 390 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 EPHB2P29323 1055 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 PDX1P52945 283 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 ADKP55263 362 aaKnown RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 PTP4A2Q12974 167 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 EIF3IQ13347 325 aaKnown RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 ELOCQ15369 112 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 KLHL40Q2TBA0 621 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 EFHC2Q5JST6 749 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 PERM1Q5SV97 790 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 ARHGAP40Q5TG30 622 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 SLFN11Q7Z7L1 901 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 ZNF354CQ86Y25 554 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 C3orf20Q8ND61 904 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 HCAR2Q8TDS4 363 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 SCG3Q8WXD2 468 aaKnown RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 LIN37Q96GY3 246 aaPredicted RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 PRR11Q96HE9 360 aaPredicted RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 CCDC3Q9BQI4 270 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 CPEB1Q9BZB8 566 aaKnown RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 NUP62CLQ9H1M0 184 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 TCEAL2Q9H3H9 227 aaPredicted RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 NOL6Q9H6R4 1146 aaKnown RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 DONSONQ9NYP3 566 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 PNMA8BQ9ULN7 279 aaPredicted RBP11.01□□□□□ -0.65
USP1-204ENST00000452143 GTF3C3Q9Y5Q9 886 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 SCN8AQ9UQD0 1980 aa11.01□□□□□ -0.65
USP1-204ENST00000452143 TSPAN11A1L157 253 aa11□□□□□ -0.65
USP1-204ENST00000452143 ANKRD62A6NC57 917 aa11□□□□□ -0.65
USP1-204ENST00000452143 WASH4PA8MWX3 477 aa11□□□□□ -0.65
USP1-204ENST00000452143 K7ENP7 123 aa11□□□□□ -0.65
USP1-204ENST00000452143 NTN3O00634 580 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 YY2O15391 372 aa11□□□□□ -0.65
USP1-204ENST00000452143 FGF10O15520 208 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 TPM2P07951 284 aa11□□□□□ -0.65
USP1-204ENST00000452143 XPAP23025 273 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 HTR7P34969 479 aa11□□□□□ -0.65
USP1-204ENST00000452143 RFC1P35251 1148 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 HK3P52790 923 aa11□□□□□ -0.65
USP1-204ENST00000452143 POLR2FP61218 127 aaKnown RBP11□□□□□ -0.65
USP1-204ENST00000452143 LRRC14Q15048 493 aa11□□□□□ -0.65
USP1-204ENST00000452143 AGERQ15109 404 aa11□□□□□ -0.65
USP1-204ENST00000452143 IRF4Q15306 451 aa11□□□□□ -0.65
USP1-204ENST00000452143 TMEM52BQ4KMG9 183 aa11□□□□□ -0.65
USP1-204ENST00000452143 LRRC73Q5JTD7 316 aa11□□□□□ -0.65
USP1-204ENST00000452143 FKBP15Q5T1M5 1219 aa11□□□□□ -0.65
USP1-204ENST00000452143 FAXCQ5TGI0 409 aa11□□□□□ -0.65
USP1-204ENST00000452143 CDKAL1Q5VV42 579 aa11□□□□□ -0.65
USP1-204ENST00000452143 INO80CQ6PI98 192 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 CRTC1Q6UUV9 634 aa11□□□□□ -0.65
USP1-204ENST00000452143 LEKR1Q6ZMV7 388 aa11□□□□□ -0.65
USP1-204ENST00000452143 DNAAF5Q86Y56 855 aa11□□□□□ -0.65
USP1-204ENST00000452143 PHF13Q86YI8 300 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 UMODL1-AS1Q8N2C9 162 aa11□□□□□ -0.65
USP1-204ENST00000452143 OR6C4Q8NGE1 309 aa11□□□□□ -0.65
USP1-204ENST00000452143 ATL2Q8NHH9 583 aa11□□□□□ -0.65
USP1-204ENST00000452143 SLC30A5Q8TAD4 765 aa11□□□□□ -0.65
USP1-204ENST00000452143 TTC9Q92623 222 aa11□□□□□ -0.65
USP1-204ENST00000452143 WRAP53Q9BUR4 548 aaKnown RBP11□□□□□ -0.65
USP1-204ENST00000452143 SELENOOQ9BVL4 669 aa11□□□□□ -0.65
USP1-204ENST00000452143 CLPBQ9H078 707 aa11□□□□□ -0.65
USP1-204ENST00000452143 CATSPERBQ9H7T0 1116 aa11□□□□□ -0.65
USP1-204ENST00000452143 MBNL1Q9NR56 388 aaKnown RBP11□□□□□ -0.65
USP1-204ENST00000452143 FAM207AQ9NSI2 230 aaPredicted RBP11□□□□□ -0.65
USP1-204ENST00000452143 TAB2Q9NYJ8 693 aa11□□□□□ -0.65
USP1-204ENST00000452143 ADAM22Q9P0K1 906 aa11□□□□□ -0.65
USP1-204ENST00000452143 PADI4Q9UM07 663 aa11□□□□□ -0.65
USP1-204ENST00000452143 DOLKQ9UPQ8 538 aa11□□□□□ -0.65
USP1-204ENST00000452143 UBR5O95071 2799 aaPredicted RBP10.99□□□□□ -0.65
USP1-204ENST00000452143 RASA4BC9J798 803 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 D6RAR5 112 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 TMX2-CTNND1H3BSU7 103 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 RASA4O43374 803 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 RASGRP1O95267 797 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 C6P13671 934 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 TIMP2P16035 220 aa10.99□□□□□ -0.65
USP1-204ENST00000452143 DESP17661 470 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms