RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 PSKH2Q96QS6 385 aa20.6■□□□□ 0.89
UBE2D4-207ENST00000450743 WRAP53Q9BUR4 548 aaKnown RBP20.6■□□□□ 0.89
UBE2D4-207ENST00000450743 DEF6Q9H4E7 631 aa20.6■□□□□ 0.89
UBE2D4-207ENST00000450743 ATP13A3Q9H7F0 1226 aa20.6■□□□□ 0.89
UBE2D4-207ENST00000450743 ABHD10Q9NUJ1 306 aa20.6■□□□□ 0.89
UBE2D4-207ENST00000450743 SEPT3Q9UH03 358 aa20.6■□□□□ 0.89
UBE2D4-207ENST00000450743 MUSKO15146 869 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 AKR1B10O60218 316 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 PROSCO94903 275 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 DGKAP23743 735 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 IL4RP24394 825 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 SLC10A7Q0GE19 358 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 DNAJC3Q13217 504 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 FZD2Q14332 565 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 LBRQ14739 615 aaKnown RBP20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 CFAP58Q5T655 872 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 TMCO4Q5TGY1 634 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 BRAT1Q6PJG6 821 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 CCNI2Q6ZMN8 369 aaPredicted RBP20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 CPNE8Q86YQ8 564 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 CHP1Q99653 195 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 CAAP1Q9H8G2 361 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 PCDH12Q9NPG4 1184 aa20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 RCOR3Q9P2K3 495 aaPredicted RBP20.59■□□□□ 0.89
UBE2D4-207ENST00000450743 SPTY2D1-AS1A0A0U1RR47 76 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 TMEM8BA6NDV4 472 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 MFAP3LO75121 409 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 PIAS2O75928 621 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 CD48P09326 243 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 SERPINA4P29622 427 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 SERPINB6P35237 376 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 RENBPP51606 427 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 ARSEP51690 589 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 ADKP55263 362 aaKnown RBP20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 PFN3P60673 137 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 MMRN1Q13201 1228 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 ATP13A4Q4VNC1 1196 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 ZNF542PQ5EBM4 170 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 ZSWIM9Q86XI8 627 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 C1QTNF7Q9BXJ2 289 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 UCKL1Q9NWZ5 548 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 DNAJC28Q9NX36 388 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 PCDHGA1Q9Y5H4 931 aa20.58■□□□□ 0.89
UBE2D4-207ENST00000450743 ASXL3Q9C0F0 2248 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 TRIM38O00635 465 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 RIOK3O14730 519 aaKnown RBP20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 MAFKO60675 156 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 PEX11BO96011 259 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 C1SP09871 688 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 TMEM253P0C7T8 217 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 IGFALSP35858 605 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 SCNN1BP51168 640 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 AP1S1P61966 158 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 BCL2L1Q07817 233 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 ACACAQ13085 2346 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 PDE1CQ14123 709 aaPredicted RBP20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 TPRG1LQ5T0D9 272 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 ERAP2Q6P179 960 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 DHRS13Q6UX07 377 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 KDM7AQ6ZMT4 941 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 ECHDC3Q96DC8 303 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 NSMCE3Q96MG7 304 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 LCMT1Q9UIC8 334 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 ATP8A1Q9Y2Q0 1164 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 LRP4O75096 1905 aa20.57■□□□□ 0.88
UBE2D4-207ENST00000450743 SIGLEC6O43699 453 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 CSF2P04141 144 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 NME1P15531 152 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 CKMT2P17540 419 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 GJC1P36383 396 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 HSPA9P38646 679 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 MMP12P39900 470 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 ACADVLP49748 655 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 TAS2R40P59535 323 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 HNRNPKP61978 463 aaKnown RBP eCLIP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 ZNF211Q13398 564 aaPredicted RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 DPYSL3Q14195 570 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 ZNF235Q14590 738 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 SMAD1Q15797 465 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 PROX2Q3B8N5 592 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 PARGQ86W56 976 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 GALNT15Q8N3T1 639 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 ATPAF2Q8N5M1 289 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 TP53I13Q8NBR0 393 aaPredicted RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 OR4C6Q8NH72 309 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 CCDC42Q96M95 316 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 NHEJ1Q9H9Q4 299 aaPredicted RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 MBNL1Q9NR56 388 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 COQ6Q9Y2Z9 468 aa20.56■□□□□ 0.88
UBE2D4-207ENST00000450743 TRAFD1O14545 582 aaPredicted RBP20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 FFAR2O15552 330 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 RFPL3O75679 317 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 PRKCGP05129 697 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 GIMD1P0DJR0 217 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 CDK4P11802 303 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 LIG3P49916 1009 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 THOP1P52888 689 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 YPEL5P62699 121 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 SEMG2Q02383 582 aa20.55■□□□□ 0.88
UBE2D4-207ENST00000450743 KCTD6Q8NC69 237 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms