RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 DPY19L3Q6ZPD9 716 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 HMGB4Q8WW32 186 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 FAM129BQ96TA1 746 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 TSC22D3Q99576 134 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 NSRP1Q9H0G5 558 aaKnown RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 CARD9Q9H257 536 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 SAMD15Q9P1V8 674 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 ZFATQ9P243 1243 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 LHX3Q9UBR4 397 aa9.98□□□□□ -0.81
CCDC171-203ENST00000449575 UBA2Q9UBT2 640 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-203ENST00000449575 PLXND1Q9Y4D7 1925 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 CEP104O60308 925 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 TDGF1P13385 188 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 NDUFV2P19404 249 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 EIF3BP55884 814 aaKnown RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF844Q08AG5 666 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 AP1B1Q10567 949 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 ZBTB17Q13105 803 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 HLTFQ14527 1009 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 SIX1Q15475 284 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 SLC13A5Q86YT5 568 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 ZFAND2BQ8WV99 257 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 HDAC11Q96DB2 347 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 MRGPRX1Q96LB2 322 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 ZNF570Q96NI8 536 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 FAM129AQ9BZQ8 928 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 YIPF3Q9GZM5 350 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 IRAK4Q9NWZ3 460 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 INVSQ9Y283 1065 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 NFS1Q9Y697 457 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 APOC4-APOC2K7ER74 178 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 CES2O00748 559 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 DIAPH2O60879 1101 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 ATG13O75143 517 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 APOC2P02655 101 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 FGGP02679 453 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 TGM2P21980 687 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 NNMTP40261 264 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 CSTF1Q05048 431 aaKnown RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 PPIDQ08752 370 aaKnown RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 NOMO1Q15155 1222 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 SPDYCQ5MJ68 293 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 SEL1L2Q5TEA6 688 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 SDE2Q6IQ49 451 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 MMAAQ8IVH4 418 aaKnown RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 GBP7Q8N8V2 638 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 GRIN3AQ8TCU5 1115 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 AGAP11Q8TF27 550 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 RLN3Q8WXF3 142 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 KRT12Q99456 494 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 PRMT8Q9NR22 394 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-203ENST00000449575 EBF1Q9UH73 591 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 SLC8A2Q9UPR5 921 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 EFR3BQ9Y2G0 817 aa9.97□□□□□ -0.81
CCDC171-203ENST00000449575 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 LAMTOR5O43504 91 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 SYNCRIPO60506 623 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TJP3O95049 919 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 NQO1P15559 274 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 ZFXP17010 805 aaPredicted RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 CCR3P51677 355 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 SRSF5Q13243 272 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 LBRQ14739 615 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 ANGPT1Q15389 498 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TRMT11Q7Z4G4 463 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TBC1D1Q86TI0 1168 aaPredicted RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TMPRSS6Q8IU80 811 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 CNTD1Q8N815 330 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 KDM1BQ8NB78 822 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TSTD1Q8NFU3 115 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 C1orf54Q8WWF1 131 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TSGA13Q96PP4 275 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 PAPOLBQ9NRJ5 636 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 SEPT10Q9P0V9 454 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 SERGEFQ9UGK8 458 aa9.96□□□□□ -0.81
CCDC171-203ENST00000449575 EVLQ9UI08 416 aaPredicted RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 NOVA2Q9UNW9 492 aaKnown RBP9.96□□□□□ -0.81
CCDC171-203ENST00000449575 TRPM6Q9BX84 2022 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 ESYT3A0FGR9 886 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 H0Y858 1186 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 NPC1O15118 1278 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 CCNCP24863 283 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 RBL1P28749 1068 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 FNTBP49356 437 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 VASPP50552 380 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-203ENST00000449575 DGKEP52429 567 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 RHOAP61586 193 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 PRKD1Q15139 912 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-203ENST00000449575 HSF5Q4G112 596 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-203ENST00000449575 INO80DQ53TQ3 878 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-203ENST00000449575 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 TRPM8Q7Z2W7 1104 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 HOOK3Q86VS8 718 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 NT5MQ9NPB1 228 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 HECAQ9UBI9 543 aaPredicted RBP9.96□□□□□ -0.82
CCDC171-203ENST00000449575 RAPGEFL1Q9UHV5 662 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 DNPEPQ9ULA0 475 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 WASF2Q9Y6W5 498 aa9.96□□□□□ -0.82
CCDC171-203ENST00000449575 ZSCAN5CA6NGD5 496 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms