RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 C2CD4AQ8NCU7 369 aaPredicted RBP16.23■□□□□ 0.19
AP000253.1-201ENST00000449339 MAGEC3Q8TD91 643 aa16.23■□□□□ 0.19
AP000253.1-201ENST00000449339 ADAMTS19Q8TE59 1207 aa16.23■□□□□ 0.19
AP000253.1-201ENST00000449339 FAM167BQ9BTA0 163 aa16.23■□□□□ 0.19
AP000253.1-201ENST00000449339 C1QTNF1Q9BXJ1 281 aa16.23■□□□□ 0.19
AP000253.1-201ENST00000449339 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 GJA1P17302 382 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 GABRR2P28476 465 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ERVFC1P60507 584 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 TMEM240Q5SV17 173 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 TMCO4Q5TGY1 634 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 GAREM2Q75VX8 874 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 SPRED2Q7Z698 418 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 SREK1Q8WXA9 508 aaKnown RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 TADA1Q96BN2 335 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 TSNARE1Q96NA8 513 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 RANBP9Q96S59 729 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 SEMA3CQ99985 751 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 POLR1EQ9GZS1 481 aaKnown RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 TLE6Q9H808 572 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 DENND4CQ5VZ89 1909 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 FAM95CA0A1B0GW59 222 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 CAPN14A8MX76 684 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ATP5BP06576 529 aaKnown RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 APOA4P06727 396 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ESRRAP11474 423 aaPredicted RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 HDCP19113 662 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 PPP3CCP48454 512 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 POLD2P49005 469 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 RAB10P61026 200 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ZNF235Q14590 738 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 TSTD2Q5T7W7 516 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ITIH5Q86UX2 942 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 LCA5Q86VQ0 697 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 CLP1Q92989 425 aaKnown RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 MIPEPQ99797 713 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 BTBD10Q9BSF8 475 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ACE2Q9BYF1 805 aaPredicted RBP16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 MAGEH1Q9H213 219 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 PNPOQ9NVS9 261 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 PRKAG2Q9UGJ0 569 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 FBXO5Q9UKT4 447 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 ACOT9Q9Y305 439 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 INSL6Q9Y581 213 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 CPQQ9Y646 472 aa16.22■□□□□ 0.19
AP000253.1-201ENST00000449339 HIDE1A8MVS5 230 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 TK2O00142 265 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 TRIM13O60858 407 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 CLDN11O75508 207 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 RHOCP08134 193 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 SERPINA6P08185 405 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 STMN1P16949 149 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 SYN1P17600 705 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 SLC8A1P32418 973 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 CD151P48509 253 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 ZNF460Q14592 562 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 SIRPB2Q5JXA9 342 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 LILRA6Q6PI73 481 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 NAPRTQ6XQN6 538 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 UBE2Q1Q7Z7E8 422 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 CEP97Q8IW35 865 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 CENPLQ8N0S6 344 aaPredicted RBP16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 TMEM151AQ8N4L1 468 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 MAB21L3Q8N8X9 362 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 OR13J1Q8NGT2 312 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 KCTD4Q8WVF5 259 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 BHMTQ93088 406 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 TCF25Q9BQ70 676 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 STN1Q9H668 368 aaKnown RBP16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 MID2Q9UJV3 735 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 LAMA3Q16787 3333 aa16.21■□□□□ 0.19
AP000253.1-201ENST00000449339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 LOC285095A0A1B0GVY8 99 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 CARNS1A5YM72 827 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 GREM1O60565 184 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 PAPSS2O95340 614 aaPredicted RBP16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 C8AP07357 584 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 COL6A2P12110 1019 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 GLRBP48167 497 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 ALDH18A1P54886 795 aaKnown RBP16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 OXCT1P55809 520 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 ZNF177Q13360 481 aaPredicted RBP16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 PLPP4Q5VZY2 271 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 KIAA0408Q6ZU52 694 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 RNF135Q8IUD6 432 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 GPATCH11Q8N954 259 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 FAM13CQ8NE31 585 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 RDH11Q8TC12 318 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 CALML6Q8TD86 181 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 SLC22A17Q8WUG5 538 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 OXSMQ9NWU1 459 aa16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 RUVBL2Q9Y230 463 aaKnown RBP16.21■□□□□ 0.18
AP000253.1-201ENST00000449339 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 A0A1B0GVM2 712 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 TCAF2A6NFQ2 919 aa16.2■□□□□ 0.18
AP000253.1-201ENST00000449339 AURKAO14965 403 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms