RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 IL4RP24394 825 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 CCR5P51681 352 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 AFF3P51826 1226 aaKnown RBP14.74□□□□□ -0.05
USP39-206ENST00000448971 VAV2P52735 878 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 HADHBP55084 474 aaKnown RBP14.74□□□□□ -0.05
USP39-206ENST00000448971 GSDMDP57764 484 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 LBRQ14739 615 aaKnown RBP14.74□□□□□ -0.05
USP39-206ENST00000448971 KIF19Q2TAC6 998 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 ZNF805Q5CZA5 627 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 C11orf63Q6NUN7 778 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 LAYNQ6UX15 382 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 GDPD4Q6W3E5 623 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 DAAM2Q86T65 1068 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 TRIM69Q86WT6 500 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 TMEM139Q8IV31 216 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 PCDH19Q8TAB3 1148 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 RAPGEF5Q92565 580 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 SLC6A18Q96N87 628 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 ZNF830Q96NB3 372 aaPredicted RBP14.74□□□□□ -0.05
USP39-206ENST00000448971 KLHL32Q96NJ5 620 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 ZNF599Q96NL3 588 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 TM9SF3Q9HD45 589 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 DDX56Q9NY93 547 aaKnown RBP14.74□□□□□ -0.05
USP39-206ENST00000448971 SEPT3Q9UH03 358 aa14.74□□□□□ -0.05
USP39-206ENST00000448971 KALRNO60229 2985 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 C16orf96A6NNT2 1141 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 NEMP1O14524 444 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 INSIG1O15503 277 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 PSTPIP1O43586 416 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 RNGTTO60942 597 aaKnown RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 XPAP23025 273 aaPredicted RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 GRIA4P48058 902 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 RENBPP51606 427 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 TAS2R38P59533 333 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 CYP4F3Q08477 520 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 GRM3Q14832 879 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 PAFAH1B3Q15102 231 aaKnown RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 SETMARQ53H47 684 aaPredicted RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 LRRC38Q5VT99 294 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 PRPF39Q86UA1 669 aaKnown RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 TXLNBQ8N3L3 684 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 TSEN2Q8NCE0 465 aaKnown RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 FAF2Q96CS3 445 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 SERAC1Q96JX3 654 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 DESI2Q9BSY9 194 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 MAK16Q9BXY0 300 aaKnown RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 REXO2Q9Y3B8 237 aaKnown RBP14.73□□□□□ -0.05
USP39-206ENST00000448971 SNX11Q9Y5W9 270 aa14.73□□□□□ -0.05
USP39-206ENST00000448971 A0A1W2PQU0 124 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 RCCD1A6NED2 376 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 KCNK3O14649 394 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 APOL1O14791 398 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 MAFKO60675 156 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 NEBLO76041 1014 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 SERPINA4P29622 427 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 GARSP41250 739 aaKnown RBP14.72□□□□□ -0.05
USP39-206ENST00000448971 ABL2P42684 1182 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 RGRP47804 291 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 C21orf59P57076 290 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 RACK1P63244 317 aaKnown RBP14.72□□□□□ -0.05
USP39-206ENST00000448971 SLC10A7Q0GE19 358 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 GALNT2Q10471 571 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 SUZ12Q15022 739 aaKnown RBP14.72□□□□□ -0.05
USP39-206ENST00000448971 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 LRRC73Q5JTD7 316 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 NAPEPLDQ6IQ20 393 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 TIGD7Q6NT04 549 aaPredicted RBP14.72□□□□□ -0.05
USP39-206ENST00000448971 RFX6Q8HWS3 928 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 CCDC50Q8IVM0 306 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 PQLC3Q8N755 202 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 RNF157Q96PX1 679 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 TUBGCP5Q96RT8 1024 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 MYOCQ99972 504 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 ORAI3Q9BRQ5 295 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 ATP13A3Q9H7F0 1226 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 ITM2BQ9Y287 266 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 ANKRD6Q9Y2G4 727 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.72□□□□□ -0.05
USP39-206ENST00000448971 ALG6Q9Y672 507 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 SHROOM3Q8TF72 1996 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 ARID1BQ8NFD5 2236 aaPredicted RBP14.72□□□□□ -0.05
USP39-206ENST00000448971 PLXNA2O75051 1894 aa14.72□□□□□ -0.05
USP39-206ENST00000448971 PTPRQQ9UMZ3 2332 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 A0A087WV48 116 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 ZNF487B1APH4 448 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 TNFSF14O43557 240 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 LATO43561 262 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 PCDHGA12O60330 932 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 PRLRP16471 622 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 MX2P20592 715 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 NUDT1P36639 197 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
USP39-206ENST00000448971 MMP13P45452 471 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 SCNN1BP51168 640 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 AP1S1P61966 158 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 DYNLT1P63172 113 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 GBE1Q04446 702 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 SMAD1Q15797 465 aaKnown RBP14.71□□□□□ -0.05
USP39-206ENST00000448971 IFI16Q16666 785 aaKnown RBP14.71□□□□□ -0.05
USP39-206ENST00000448971 MARC1Q5VT66 337 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms