RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SUV39H2Q9H5I1 410 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 ARNT2Q9HBZ2 717 aa19.7■□□□□ 0.74
SGCE-207ENST00000447873 SDR42E2A6NKP2 422 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 TRAFD1O14545 582 aaPredicted RBP19.69■□□□□ 0.74
SGCE-207ENST00000447873 SYNCRIPO60506 623 aaKnown RBP19.69■□□□□ 0.74
SGCE-207ENST00000447873 BANF1O75531 89 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 LEFTY1O75610 366 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 PGLSO95336 258 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 FGF1P05230 155 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 UGT2B4P06133 528 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 ATXN1LP0C7T5 689 aaKnown RBP19.69■□□□□ 0.74
SGCE-207ENST00000447873 H2AFXP16104 143 aaPredicted RBP19.69■□□□□ 0.74
SGCE-207ENST00000447873 NPY2RP49146 381 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 ARSIQ5FYB1 569 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 HP1BP3Q5SSJ5 553 aaPredicted RBP19.69■□□□□ 0.74
SGCE-207ENST00000447873 CFAP58Q5T655 872 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 DENND5AQ6IQ26 1287 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 GDPD4Q6W3E5 623 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 ZBED8Q8IZ13 594 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 STK40Q8N2I9 435 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 LPCAT1Q8NF37 534 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 CAVIN3Q969G5 261 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 OSBPL1AQ9BXW6 950 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 MRPS17Q9Y2R5 130 aaKnown RBP19.69■□□□□ 0.74
SGCE-207ENST00000447873 WASF2Q9Y6W5 498 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 TRIOO75962 3097 aa19.69■□□□□ 0.74
SGCE-207ENST00000447873 E7ESA3 106 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 HTRA2O43464 458 aaPredicted RBP19.68■□□□□ 0.74
SGCE-207ENST00000447873 FZD6O60353 706 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 RNF40O75150 1001 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 PRLP01236 227 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 TPH1P17752 444 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 MGAT1P26572 445 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 EPHB1P54762 984 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 CKAP5Q14008 2032 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 FBXO38Q6PIJ6 1188 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 TMC3Q7Z5M5 1100 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 IL17RCQ8NAC3 791 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 VOPP1Q96AW1 172 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 PRSS16Q9NQE7 514 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 MUTYHQ9UIF7 546 aa19.68■□□□□ 0.74
SGCE-207ENST00000447873 KRBA1A5PL33 1030 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 ANKRD66B4E2M5 251 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 ALOX15BO15296 676 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 KLF8O95600 359 aaPredicted RBP19.67■□□□□ 0.74
SGCE-207ENST00000447873 PRNPP04156 253 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 CTSLP07711 333 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 CHRM1P11229 460 aaPredicted RBP19.67■□□□□ 0.74
SGCE-207ENST00000447873 MAGEA4P43358 317 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 CBLBQ13191 982 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 CERCAMQ5T4B2 595 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 DENND2CQ68D51 928 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 CASC4Q6P4E1 433 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 DSG4Q86SJ6 1040 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 ANKMY2Q8IV38 441 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 SIX5Q8N196 739 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 TXNDC5Q8NBS9 432 aaKnown RBP19.67■□□□□ 0.74
SGCE-207ENST00000447873 LRRC39Q96DD0 335 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 SIGLEC10Q96LC7 697 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 KLHL32Q96NJ5 620 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 GABRG3Q99928 467 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 IL22Q9GZX6 179 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 ARFGAP3Q9NP61 516 aa19.67■□□□□ 0.74
SGCE-207ENST00000447873 A0A1W2PQ67 120 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 DYNC1I1O14576 645 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 CPP00450 1065 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 ALADP13716 330 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 ELK3P41970 407 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 STARD6P59095 220 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 RPL26P61254 145 aaKnown RBP19.66■□□□□ 0.74
SGCE-207ENST00000447873 STARD3Q14849 445 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 FASTKD3Q14CZ7 662 aaKnown RBP19.66■□□□□ 0.74
SGCE-207ENST00000447873 RELL1Q8IUW5 271 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 AGGF1Q8N302 714 aaeCLIP19.66■□□□□ 0.74
SGCE-207ENST00000447873 MPP5Q8N3R9 675 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 RPLP0P6Q8NHW5 317 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 PYROXD1Q8WU10 500 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 ECHDC3Q96DC8 303 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 ERLEC1Q96DZ1 483 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 FAM129BQ96TA1 746 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 SYBUQ9NX95 663 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 SAMD15Q9P1V8 674 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 RPL26L1Q9UNX3 145 aaKnown RBP19.66■□□□□ 0.74
SGCE-207ENST00000447873 CHMP2BQ9UQN3 213 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 MAD1L1Q9Y6D9 718 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 TEX264Q9Y6I9 313 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 HOXB2P14652 356 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 GRIA4P48058 902 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 PMS2P54278 862 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 CRADDP78560 199 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 CAMK2GQ13555 558 aaPredicted RBP19.66■□□□□ 0.74
SGCE-207ENST00000447873 POU6F1Q14863 301 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 CCDC38Q502W7 563 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 BEND6Q5SZJ8 279 aaPredicted RBP19.66■□□□□ 0.74
SGCE-207ENST00000447873 NDUFAF2Q8N183 169 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 FBXO36Q8NEA4 188 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 TMIEQ8NEW7 156 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 PIH1D2Q8WWB5 315 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 STAMBPL1Q96FJ0 436 aa19.66■□□□□ 0.74
SGCE-207ENST00000447873 C9orf72Q96LT7 481 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms