RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ALDH3B2P48448 385 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SLC12A2P55011 1212 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 GEMP55040 296 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 C1QTNF8P60827 252 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 USP46P62068 366 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 ZNF470Q6ECI4 717 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 MOB2Q70IA6 237 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 HERC6Q8IVU3 1022 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SGF29Q96ES7 293 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 PCED1BQ96HM7 432 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 ZNF419Q96HQ0 510 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 PPP1R10Q96QC0 940 aaKnown RBP19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SLC25A23Q9BV35 468 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 FICDQ9BVA6 458 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SEMA6AQ9H2E6 1030 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 SLC2A6Q9UGQ3 507 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 PTCH2Q9Y6C5 1203 aa19.24■□□□□ 0.67
SDCBP-204ENST00000447182 A8MT66 165 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 PTGESO14684 152 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 SNRPB2P08579 225 aaKnown RBP19.23■□□□□ 0.67
SDCBP-204ENST00000447182 CYP2C18P33260 490 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 LHX1P48742 406 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 AGKQ53H12 422 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 SAMD4BQ5PRF9 694 aaKnown RBP19.23■□□□□ 0.67
SDCBP-204ENST00000447182 AGAP9Q5VTM2 703 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 ARHGAP36Q6ZRI8 547 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 CUZD1Q86UP6 607 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 ARHGAP12Q8IWW6 846 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 NUP93Q8N1F7 819 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 TMEM86AQ8N2M4 240 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 ATPAF2Q8N5M1 289 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 EDEM1Q92611 657 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 EFHD1Q9BUP0 239 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 PRKD2Q9BZL6 878 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 UNKQ9C0B0 810 aaKnown RBP19.23■□□□□ 0.67
SDCBP-204ENST00000447182 ADARB2Q9NS39 739 aaKnown RBP19.23■□□□□ 0.67
SDCBP-204ENST00000447182 TANC1Q9C0D5 1861 aa19.23■□□□□ 0.67
SDCBP-204ENST00000447182 H3BNH8 94 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 TUBA4AP68366 448 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CSHL1Q14406 222 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 C6orf10Q5SRN2 563 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 BTBD8Q5XKL5 378 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CTU1Q7Z7A3 348 aaKnown RBP19.22■□□□□ 0.67
SDCBP-204ENST00000447182 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.22■□□□□ 0.67
SDCBP-204ENST00000447182 LZICQ8WZA0 190 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 PBXIP1Q96AQ6 731 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 MAML3Q96JK9 1138 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 SENP8Q96LD8 212 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CCT7Q99832 543 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 TRPV6Q9H1D0 765 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 PNPLA3Q9NST1 481 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 UTRNP46939 3433 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 MYBPHLA2RUH7 354 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 DFFAO00273 331 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 MATN3O15232 486 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 MAFKO60675 156 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CSPG5O95196 566 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 KCNA5P22460 613 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 ACADVLP49748 655 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 ATP4BP51164 291 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 SLC14A2Q15849 920 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 MTX3Q5HYI7 312 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 TAC4Q86UU9 113 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 ANKRD60Q9BZ19 345 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 PREBQ9HCU5 417 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 TNFRSF12AQ9NP84 129 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CHST12Q9NRB3 414 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 OLAHQ9NV23 265 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CCDC167Q9P0B6 97 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 RSL24D1Q9UHA3 163 aaKnown RBP19.22■□□□□ 0.67
SDCBP-204ENST00000447182 CROTQ9UKG9 612 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 MYRFQ9Y2G1 1151 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.22■□□□□ 0.67
SDCBP-204ENST00000447182 SNX13Q9Y5W8 968 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 GMEB1Q9Y692 573 aa19.22■□□□□ 0.67
SDCBP-204ENST00000447182 DICER1Q9UPY3 1922 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 A0A1B0GTW7 788 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 MRASO14807 208 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 HNRNPRO43390 633 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 NRP2O60462 931 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 RBP1P09455 135 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 IGFBP6P24592 240 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 RANBP1P43487 201 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 CDK9P50750 372 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 RALGDSQ12967 914 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 CYTH1Q15438 398 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 HMBOX1Q6NT76 420 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 NEPROQ6NW34 567 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 RANBP10Q6VN20 620 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 ERI1Q8IV48 349 aaKnown RBP19.21■□□□□ 0.67
SDCBP-204ENST00000447182 SLC22A9Q8IVM8 553 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 TRIML2Q8N7C3 387 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 ANKFN1Q8N957 763 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 HM13Q8TCT9 377 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 TRPC4APQ8TEL6 797 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 DNAJB3Q8WWF6 145 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 RANBP9Q96S59 729 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 SLC29A1Q99808 456 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 TMEM79Q9BSE2 394 aa19.21■□□□□ 0.67
SDCBP-204ENST00000447182 TRMOQ9BU70 441 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms