RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 ERVMER34-1Q9H9K5 563 aa18.95■□□□□ 0.62
HDAC4-203ENST00000445704 PCNX2A6NKB5 2137 aa18.95■□□□□ 0.62
HDAC4-203ENST00000445704 RCCD1A6NED2 376 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 TRAFD1O14545 582 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 MAGEC1O60732 1142 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 NDUFA10O95299 355 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 TOP3BO95985 862 aaKnown RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 KRT1P04264 644 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 TNNT1P13805 278 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 XPAP23025 273 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 EPHA8P29322 1005 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 HSPA9P38646 679 aaKnown RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 SLC1A1P43005 524 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 MMP13P45452 471 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 RXRGP48443 463 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 BCL2L1Q07817 233 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 FOXC1Q12948 553 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 BNIP3Q12983 259 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 SGCGQ13326 291 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 HNRNPDQ14103 355 aaKnown RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 SUZ12Q15022 739 aaKnown RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 TMEM52BQ4KMG9 183 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 CFAP58Q5T655 872 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 LRRC38Q5VT99 294 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 BRAT1Q6PJG6 821 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 RAD9BQ6WBX8 426 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 KYAT3Q6YP21 454 aaKnown RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 LRRC49Q8IUZ0 686 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 TEX26Q8N6G2 289 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 PLD5Q8N7P1 536 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 CXorf40AQ8TE69 158 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 RHBDD1Q8TEB9 315 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 SAP25Q8TEE9 199 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 ASB12Q8WXK4 309 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 LENG8Q96PV6 779 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 NUDCD1Q96RS6 583 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 NOD2Q9HC29 1040 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 GPR27Q9NS67 375 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 DTLQ9NZJ0 730 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 SALL4Q9UJQ4 1053 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 ATP8A1Q9Y2Q0 1164 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 COQ6Q9Y2Z9 468 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 REXO2Q9Y3B8 237 aaKnown RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 PCDHB9Q9Y5E1 797 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 HS3ST3A1Q9Y663 406 aa18.94■□□□□ 0.62
HDAC4-203ENST00000445704 EPN1Q9Y6I3 576 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-203ENST00000445704 A6NNZ2 444 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 ZNF487B1APH4 448 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 RIOK3O14730 519 aaKnown RBP18.93■□□□□ 0.62
HDAC4-203ENST00000445704 IGFALSP35858 605 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 MMP12P39900 470 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 GRK6P43250 576 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 NOP2P46087 812 aaKnown RBP18.93■□□□□ 0.62
HDAC4-203ENST00000445704 ARRB1P49407 418 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-203ENST00000445704 SUOXP51687 545 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 ELP6Q0PNE2 266 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 SPA17Q15506 151 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 TPRG1LQ5T0D9 272 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 MARC1Q5VT66 337 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 Q6ZSR6 202 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 KANSL1Q7Z3B3 1105 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 PTAR1Q7Z6K3 402 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-203ENST00000445704 TMTC1Q8IUR5 882 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 RHOT1Q8IXI2 618 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 OXR1Q8N573 874 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 NSMCE1Q8WV22 266 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 MAML1Q92585 1016 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 RNF25Q96BH1 459 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-203ENST00000445704 NT5MQ9NPB1 228 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 WASF3Q9UPY6 502 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 PCDHGC4Q9Y5F7 938 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 ALG6Q9Y672 507 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 CABIN1Q9Y6J0 2220 aa18.93■□□□□ 0.62
HDAC4-203ENST00000445704 LRRK1Q38SD2 2015 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 SPOPO43791 374 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 TM7SF2O76062 418 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 TRAF2Q12933 501 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 RALGDSQ12967 914 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 IFI16Q16666 785 aaKnown RBP18.92■□□□□ 0.62
HDAC4-203ENST00000445704 SLC9A4Q6AI14 798 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 GLRX5Q86SX6 157 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 VSIG1Q86XK7 387 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 TMEM139Q8IV31 216 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 BBS5Q8N3I7 341 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 TP53I13Q8NBR0 393 aaPredicted RBP18.92■□□□□ 0.62
HDAC4-203ENST00000445704 DENND6BQ8NEG7 585 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 CENPTQ96BT3 561 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 TSGA13Q96PP4 275 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 SCUBE2Q9NQ36 999 aa18.92■□□□□ 0.62
HDAC4-203ENST00000445704 MBNL1Q9NR56 388 aaKnown RBP18.92■□□□□ 0.62
HDAC4-203ENST00000445704 A0A0A6YYK5 440 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-203ENST00000445704 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-203ENST00000445704 FPGTO14772 594 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 MATN3O15232 486 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 YKT6O15498 198 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 HTRA2O43464 458 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-203ENST00000445704 SDC3O75056 442 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 ITGAVP06756 1048 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 FTH1P19P0C7X4 201 aa18.91■□□□□ 0.62
HDAC4-203ENST00000445704 C6P13671 934 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms