RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ZNF235Q14590 738 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 PDK2Q15119 407 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 TMEM52BQ4KMG9 183 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 ZNF542PQ5EBM4 170 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 NCBP2-AS2Q69YL0 99 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 KANSL1Q7Z3B3 1105 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 RAB44Q7Z6P3 723 aaPredicted RBP14.89□□□□□ -0.03
USE1-202ENST00000445667 ASB12Q8WXK4 309 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 RAPGEF5Q92565 580 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 PCDH12Q9NPG4 1184 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 LCMT1Q9UIC8 334 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 KLK13Q9UKR3 277 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 APOBEC2Q9Y235 224 aaKnown RBP14.89□□□□□ -0.03
USE1-202ENST00000445667 COQ6Q9Y2Z9 468 aa14.89□□□□□ -0.03
USE1-202ENST00000445667 RIOK3O14730 519 aaKnown RBP14.88□□□□□ -0.03
USE1-202ENST00000445667 TNFSF14O43557 240 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 TM7SF2O76062 418 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 LDOC1O95751 146 aaPredicted RBP14.88□□□□□ -0.03
USE1-202ENST00000445667 MAXP61244 160 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 ELP6Q0PNE2 266 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 PAFAH1B3Q15102 231 aaKnown RBP14.88□□□□□ -0.03
USE1-202ENST00000445667 INAVAQ3KP66 663 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 CCDC157Q569K6 752 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 TPRG1LQ5T0D9 272 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 BRAT1Q6PJG6 821 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 KYAT3Q6YP21 454 aaKnown RBP14.88□□□□□ -0.03
USE1-202ENST00000445667 ZSCAN30Q86W11 494 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 MAP7D3Q8IWC1 876 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 RHOT2Q8IXI1 618 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 PAF1Q8N7H5 531 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 LRRN4Q8WUT4 740 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 ADAMTS14Q8WXS8 1223 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 RFFLQ8WZ73 363 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 CENPTQ96BT3 561 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 ZNF670Q9BS34 389 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 MBNL1Q9NR56 388 aaKnown RBP14.88□□□□□ -0.03
USE1-202ENST00000445667 FTSJ1Q9UET6 329 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 HYOU1Q9Y4L1 999 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 PCDHGC4Q9Y5F7 938 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 CABIN1Q9Y6J0 2220 aa14.88□□□□□ -0.03
USE1-202ENST00000445667 TRAFD1O14545 582 aaPredicted RBP14.87□□□□□ -0.03
USE1-202ENST00000445667 MTA2O94776 668 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 TNNT1P13805 278 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 CR2P20023 1033 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 KDELR1P24390 212 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 IGFALSP35858 605 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 ARHGAP25P42331 645 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 MAGEA1P43355 309 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 SUOXP51687 545 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 AP1S1P61966 158 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 DNAJC3Q13217 504 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 FZD2Q14332 565 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 MARC1Q5VT66 337 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 DCP2Q8IU60 420 aaKnown RBP14.87□□□□□ -0.03
USE1-202ENST00000445667 SLC25A45Q8N413 288 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 PQLC3Q8N755 202 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 DENND6BQ8NEG7 585 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 FAM174AQ8TBP5 190 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 NSMCE1Q8WV22 266 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 FAF2Q96CS3 445 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 ECHDC3Q96DC8 303 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 CNDP2Q96KP4 475 aaKnown RBP14.87□□□□□ -0.03
USE1-202ENST00000445667 NOD2Q9HC29 1040 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 SCUBE2Q9NQ36 999 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 GPR27Q9NS67 375 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 UCKL1Q9NWZ5 548 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 DNAJC28Q9NX36 388 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 INTUQ9ULD6 942 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 TFR2Q9UP52 801 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 ATP8A1Q9Y2Q0 1164 aa14.87□□□□□ -0.03
USE1-202ENST00000445667 SPEGQ15772 3267 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 SPTY2D1-AS1A0A0U1RR47 76 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 LRRD1A4D1F6 860 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 A8MX80 341 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 C1QTNF9BB2RNN3 333 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 ENC1O14682 589 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 C1QTNF9P0C862 333 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 C6P13671 934 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 DGKAP23743 735 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 GARSP41250 739 aaKnown RBP14.86□□□□□ -0.03
USE1-202ENST00000445667 MMP13P45452 471 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 RABIFP47224 123 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 LIG3P49916 1009 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 PFN3P60673 137 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 GALNT2Q10471 571 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 SLC10A2Q12908 348 aaPredicted RBP14.86□□□□□ -0.03
USE1-202ENST00000445667 PDE1CQ14123 709 aaPredicted RBP14.86□□□□□ -0.03
USE1-202ENST00000445667 ERAP2Q6P179 960 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 LRRC49Q8IUZ0 686 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 BBS5Q8N3I7 341 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 TP53I13Q8NBR0 393 aaPredicted RBP14.86□□□□□ -0.03
USE1-202ENST00000445667 PDCD6IPQ8WUM4 868 aaKnown RBP14.86□□□□□ -0.03
USE1-202ENST00000445667 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 RNF157Q96PX1 679 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 NUDCD1Q96RS6 583 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 MGME1Q9BQP7 344 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 NT5MQ9NPB1 228 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 KLF15Q9UIH9 416 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 NEUROG3Q9Y4Z2 214 aa14.86□□□□□ -0.03
USE1-202ENST00000445667 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms