RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 PCDHB1Q9Y5F3 818 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 SCINQ9Y6U3 715 aa11.9□□□□□ -0.5
TTC28-203ENST00000442232 TCRBV5S1A1TA0A578 114 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 DFFAO00273 331 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 MUSKO15146 869 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 SPINT1O43278 529 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 PRAMEF11O60813 436 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 ALPIP09923 528 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 MYF5P13349 255 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 CTSEP14091 401 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 TIMP2P16035 220 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 ITPKBP27987 946 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 EIF4A3P38919 411 aaKnown RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 ZNF135P52742 658 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 ADKP55263 362 aaKnown RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 EIF2B5Q13144 721 aaKnown RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 MAMLD1Q13495 774 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 IRF4Q15306 451 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 ELOCQ15369 112 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 SOWAHCQ53LP3 525 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 ERMARDQ5T6L9 678 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 CDCP2Q5VXM1 449 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 RBM44Q6ZP01 1051 aaKnown RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 RBFAQ8N0V3 343 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 FSTL5Q8N475 847 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 TP53I13Q8NBR0 393 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 ZNF248Q8NDW4 579 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 WDR48Q8TAF3 677 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 CENPTQ96BT3 561 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 CELF6Q96J87 481 aaKnown RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 ZNF578Q96N58 590 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 ZNF641Q96N77 438 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 FCRL3Q96P31 734 aaPredicted RBP11.89□□□□□ -0.51
TTC28-203ENST00000442232 LRRC61Q9BV99 259 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 SUV39H2Q9H5I1 410 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 THSD1Q9NS62 852 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 PCSK1NQ9UHG2 260 aa11.89□□□□□ -0.51
TTC28-203ENST00000442232 LY6G6EA0A0G2JKS1 128 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 LMO7DNF2Z398 122 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 INSIG1O15503 277 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 ATMINO43313 823 aaPredicted RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 TCEA3O75764 348 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 PALMO75781 387 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 RASGRP1O95267 797 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 MPOP05164 745 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 PCCBP05166 539 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 C6P13671 934 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 RBMS1P29558 406 aaKnown RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 PEX5P50542 639 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 RENBPP51606 427 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 TPM4P67936 248 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 BCL2L1Q07817 233 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 KLHL30Q0D2K2 578 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 C1orf61Q13536 156 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 NCAPHQ15003 741 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 CYTH1Q15438 398 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 UGP2Q16851 508 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 PPP6R3Q5H9R7 873 aaPredicted RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 GUSBP11Q6P575 273 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 RFX8Q6ZV50 586 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 GKN2Q86XP6 184 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 HID1Q8IV36 788 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 ZNF653Q96CK0 615 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 GRAMD1AQ96CP6 724 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 BPIFA3Q9BQP9 254 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 SNRNP25Q9BV90 132 aaKnown RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 LRRC19Q9H756 370 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 POLR1BQ9H9Y6 1135 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 MRPL47Q9HD33 250 aaKnown RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 PCDH12Q9NPG4 1184 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 MBNL1Q9NR56 388 aaKnown RBP11.88□□□□□ -0.51
TTC28-203ENST00000442232 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 KLQ9UEF7 1012 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 ATP8A1Q9Y2Q0 1164 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 COQ6Q9Y2Z9 468 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 U3KQA8 63 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 LRP4O75096 1905 aa11.88□□□□□ -0.51
TTC28-203ENST00000442232 TSPAN11A1L157 253 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
TTC28-203ENST00000442232 J3KR12 359 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 TEX33O43247 280 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 ELFN1P0C7U0 828 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 MYBL1P10243 752 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 NFKBIAP25963 317 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 MMP12P39900 470 aa11.87□□□□□ -0.51
TTC28-203ENST00000442232 ARL4AP40617 200 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms