RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 EFHBQ8N7U6 833 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 FIBINQ8TAL6 211 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 WFDC5Q8TCV5 224 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 XPO6Q96QU8 1125 aaKnown RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 SEMA3CQ99985 751 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 APOL5Q9BWW9 433 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 SYBUQ9NX95 663 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 RABGEF1Q9UJ41 708 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 OR51B4Q9Y5P0 310 aa8.17□□□□□ -1.1
CCDC39-201ENST00000442201 MTCL1Q9Y4B5 1905 aaKnown RBP8.17□□□□□ -1.1
CCDC39-201ENST00000442201 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 BIRC5O15392 142 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SNAP91O60641 907 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 GLP2RO95838 553 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 AGTP01019 485 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 PGAM1P18669 254 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 WEE1P30291 646 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 RETSATQ6NUM9 610 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 TMEM25Q86YD3 366 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 NPAS3Q8IXF0 933 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ZNF557Q8N988 423 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 GSDMBQ8TAX9 411 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 IRF7Q92985 503 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ACDQ96AP0 544 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ALG14Q96F25 216 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 MRGPRX2Q96LB1 330 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 BBS2Q9BXC9 721 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 IL22Q9GZX6 179 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ZNF576Q9H609 170 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SPHK2Q9NRA0 654 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 INIPQ9NRY2 104 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 FETUBQ9UGM5 382 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SLC24A2Q9UI40 661 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 RABL2BQ9UNT1 228 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ITM2BQ9Y287 266 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 DOCK4Q8N1I0 1966 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 MAGEB16A2A368 324 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 MUSKO15146 869 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ZMPSTE24O75844 475 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 POLBP06746 335 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 HOXB8P17481 243 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ATP6V1C1P21283 382 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ATP5DP30049 168 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ADRA1AP35348 466 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 NEK2P51955 445 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SH3BGRP55822 239 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 GEMIN4P57678 1058 aaKnown RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ARF5P84085 180 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SLC12A1Q13621 1099 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 PCSK7Q16549 785 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 INO80DQ53TQ3 878 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 POTEHQ6S545 545 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 KDELC1Q6UW63 502 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 RANBP10Q6VN20 620 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 TDRPQ86YL5 185 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 KIAA1958Q8N8K9 716 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 FGF13Q92913 245 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SEC16BQ96JE7 1060 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 MGME1Q9BQP7 344 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LINC00597Q9H2U6 94 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 VCX3BQ9H321 246 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 VPS51Q9UID3 782 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ACTL7AQ9Y615 435 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 WNT6Q9Y6F9 365 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 OBSL1O75147 1896 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LINC01565O15544 149 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SERPINF2P08697 491 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 GNAZP19086 355 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 CCT8P50990 548 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 GUCY1A3Q02108 690 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LMAN2Q12907 356 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 RASA2Q15283 850 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 CERCAMQ5T4B2 595 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ALG1LQ6GMV1 187 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 ANKRD54Q6NXT1 300 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LINGO4Q6UY18 593 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 CHRDL2Q6WN34 429 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 KDELC2Q7Z4H8 507 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LMNTD2Q8IXW0 634 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 SMARCD2Q92925 531 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 PTPRN2Q92932 1015 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 MRRFQ96E11 262 aaKnown RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
CCDC39-201ENST00000442201 GDE1Q9NZC3 331 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LGALS13Q9UHV8 139 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 CLEC4EQ9ULY5 219 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 IKBKGQ9Y6K9 419 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 PDE4DIPQ5VU43 2346 aa8.16□□□□□ -1.1
CCDC39-201ENST00000442201 LAMA3Q16787 3333 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 NEDD8-MDP1E9PL57 170 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 MMP2P08253 660 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 TPH1P17752 444 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 CES1P23141 567 aa8.15□□□□□ -1.1
CCDC39-201ENST00000442201 VARSP26640 1264 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms