RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 RBM15Q96T37 977 aaKnown RBP eCLIP10.11□□□□□ -0.79
SYN3-204ENST00000441821 NPY6RQ99463 290 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 TM6SF2Q9BZW4 377 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 SEMA6CQ9H3T2 930 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 TMEM51Q9NW97 253 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 LRIT1Q9P2V4 623 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 PLAAQ9Y263 795 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 ACTL7AQ9Y615 435 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 LRBAP50851 2863 aa10.11□□□□□ -0.79
SYN3-204ENST00000441821 ITPR2Q14571 2701 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 ZNF891A8MT65 544 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 KRIT1O00522 736 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 HGSO14964 777 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 CAPN5O15484 640 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 NUDT21O43809 227 aaKnown RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 ZNF202O95125 648 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 GSRP00390 522 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 F9P00740 461 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 TNFP01375 233 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 CCL4P13236 92 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 LIFP15018 202 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 ARSDP51689 593 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 GEMIN4P57678 1058 aaKnown RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 SNX16P57768 344 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 SNRPD1P62314 119 aaKnown RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 SLC6A3Q01959 620 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 PKP1Q13835 747 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 ARHGEF7Q14155 803 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 HLTFQ14527 1009 aaKnown RBP eCLIP10.1□□□□□ -0.79
SYN3-204ENST00000441821 LRRC14Q15048 493 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 POLD3Q15054 466 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 WSCD2Q2TBF2 565 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 MYLK3Q32MK0 819 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 C14orf28Q4W4Y0 310 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 EFHC2Q5JST6 749 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 GDPD4Q6W3E5 623 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 OR2AP1Q8NGE2 309 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 C9orf43Q8TAL5 461 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 ARHGEF2Q92974 986 aaKnown RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 NT5C3BQ969T7 300 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 CEP63Q96MT8 703 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 APOOQ9BUR5 198 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 GTPBP4Q9BZE4 634 aaKnown RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 UBE2TQ9NPD8 197 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 ACP6Q9NPH0 428 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 ZNF71Q9NQZ8 489 aaPredicted RBP10.1□□□□□ -0.79
SYN3-204ENST00000441821 KLQ9UEF7 1012 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 NOTCH2Q04721 2471 aa10.1□□□□□ -0.79
SYN3-204ENST00000441821 LRP4O75096 1905 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 B4GAT1O43505 415 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 SRGAP2O75044 1071 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 CPNE6O95741 557 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 FGF3P11487 239 aaPredicted RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 TFE3P19532 575 aaPredicted RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 ITIH2P19823 946 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 UGT1A3P35503 534 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 ETFBP38117 255 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 UBE2HP62256 183 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 B4GALNT1Q00973 533 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 DEUP1Q05D60 604 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 INPP5AQ14642 412 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 CLPPQ16740 277 aaPredicted RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 MAP9Q49MG5 647 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 CCDC40Q4G0X9 1142 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 TMEM52BQ4KMG9 183 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 LRRC73Q5JTD7 316 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 HIST2H2BCQ6DN03 193 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 ENOSF1Q7L5Y1 443 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 TAF8Q7Z7C8 310 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 IRF2BP1Q8IU81 584 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 ZDHHC17Q8IUH5 632 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 FAM46DQ8NEK8 389 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 WDR92Q96MX6 357 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 GSDMAQ96QA5 445 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 HAPLN3Q96S86 360 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 WRAP53Q9BUR4 548 aaKnown RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 INTS2Q9H0H0 1204 aaKnown RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 RDH14Q9HBH5 336 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.09□□□□□ -0.79
SYN3-204ENST00000441821 PPARGC1AQ9UBK2 798 aaKnown RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 DKK3Q9UBP4 350 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 PLEKHB1Q9UF11 243 aaPredicted RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 STAP1Q9ULZ2 295 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 PCDHGC3Q9UN70 934 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 ZDHHC9Q9Y397 364 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 OR1A2Q9Y585 309 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 SPTAN1Q13813 2472 aaKnown RBP10.09□□□□□ -0.79
SYN3-204ENST00000441821 LRRK1Q38SD2 2015 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 UNC13CQ8NB66 2214 aa10.09□□□□□ -0.79
SYN3-204ENST00000441821 DOCK4Q8N1I0 1966 aa10.08□□□□□ -0.8
SYN3-204ENST00000441821 SDK2Q58EX2 2172 aa10.08□□□□□ -0.8
SYN3-204ENST00000441821 ERBB2P04626 1255 aa10.08□□□□□ -0.8
SYN3-204ENST00000441821 TIMP2P16035 220 aa10.08□□□□□ -0.8
SYN3-204ENST00000441821 ACVRL1P37023 503 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms