RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SYBUQ9NX95 663 aa12□□□□□ -0.49
LTBR-203ENST00000441074 SEPT3Q9UH03 358 aa12□□□□□ -0.49
LTBR-203ENST00000441074 TSC22D4Q9Y3Q8 395 aa12□□□□□ -0.49
LTBR-203ENST00000441074 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
LTBR-203ENST00000441074 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
LTBR-203ENST00000441074 NOL3O60936 208 aaKnown RBP12□□□□□ -0.49
LTBR-203ENST00000441074 TIPRLO75663 272 aa12□□□□□ -0.49
LTBR-203ENST00000441074 CABYRO75952 493 aa12□□□□□ -0.49
LTBR-203ENST00000441074 STAU1O95793 577 aaKnown RBP12□□□□□ -0.49
LTBR-203ENST00000441074 ITGB3P05106 788 aa12□□□□□ -0.49
LTBR-203ENST00000441074 C2P06681 752 aa12□□□□□ -0.49
LTBR-203ENST00000441074 STAG3L1P0CL83 205 aa12□□□□□ -0.49
LTBR-203ENST00000441074 SDC4P31431 198 aa12□□□□□ -0.49
LTBR-203ENST00000441074 CCR10P46092 362 aa12□□□□□ -0.49
LTBR-203ENST00000441074 MERTKQ12866 999 aa12□□□□□ -0.49
LTBR-203ENST00000441074 NFATC3Q12968 1075 aa12□□□□□ -0.49
LTBR-203ENST00000441074 ZBTB17Q13105 803 aa12□□□□□ -0.49
LTBR-203ENST00000441074 LRP8Q14114 963 aa12□□□□□ -0.49
LTBR-203ENST00000441074 MFSD10Q14728 455 aa12□□□□□ -0.49
LTBR-203ENST00000441074 KYAT1Q16773 422 aa12□□□□□ -0.49
LTBR-203ENST00000441074 SLC36A3Q495N2 470 aa12□□□□□ -0.49
LTBR-203ENST00000441074 FAM117BQ6P1L5 589 aa12□□□□□ -0.49
LTBR-203ENST00000441074 OLFML1Q6UWY5 402 aa12□□□□□ -0.49
LTBR-203ENST00000441074 CXCL17Q6UXB2 119 aa12□□□□□ -0.49
LTBR-203ENST00000441074 GK5Q6ZS86 529 aa12□□□□□ -0.49
LTBR-203ENST00000441074 STRA8Q7Z7C7 330 aa12□□□□□ -0.49
LTBR-203ENST00000441074 PDPRQ8NCN5 879 aa12□□□□□ -0.49
LTBR-203ENST00000441074 MOCOSQ96EN8 888 aa12□□□□□ -0.49
LTBR-203ENST00000441074 APBA2Q99767 749 aa12□□□□□ -0.49
LTBR-203ENST00000441074 UNKQ9C0B0 810 aaKnown RBP12□□□□□ -0.49
LTBR-203ENST00000441074 ADAMTS10Q9H324 1103 aa12□□□□□ -0.49
LTBR-203ENST00000441074 DHX35Q9H5Z1 703 aaKnown RBP12□□□□□ -0.49
LTBR-203ENST00000441074 SCHIP1Q9P0W5 487 aaPredicted RBP12□□□□□ -0.49
LTBR-203ENST00000441074 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
LTBR-203ENST00000441074 LACTBL1A8MY62 500 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 KPNA4O00629 521 aaPredicted RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 TSPAN1O60635 241 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 F2P00734 622 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 JUNP05412 331 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 HOXD8P13378 290 aaPredicted RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 MAPRE2Q15555 327 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 SMAD1Q15797 465 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 CYP2A13Q16696 494 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 DEPDC1Q5TB30 811 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CYP2R1Q6VVX0 501 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 COLGALT1Q8NBJ5 622 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 UBA3Q8TBC4 463 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 HTR3CQ8WXA8 447 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 MAELQ96JY0 434 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 NFKBIZQ9BYH8 718 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 DNAI2Q9GZS0 605 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 NAA50Q9GZZ1 169 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 NGRNQ9NPE2 291 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 SPAG4Q9NPE6 437 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CD320Q9NPF0 282 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 MRGBPQ9NV56 204 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 PRMT7Q9NVM4 692 aaPredicted RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 PIH1D1Q9NWS0 290 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 CACNA2D2Q9NY47 1150 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 MGAMO43451 1857 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 EVPLQ92817 2033 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 GRAP2O75791 330 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 OXSR1O95747 527 aaPredicted RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 CCNA2P20248 432 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 TMBIM6P55061 237 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 TRAF2Q12933 501 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 RALGDSQ12967 914 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 ITGADQ13349 1161 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 ARHGEF6Q15052 776 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 DLG2Q15700 870 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 GNASQ5JWF2 1037 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 SAMD4BQ5PRF9 694 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 JADE1Q6IE81 842 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 SLC2A7Q6PXP3 512 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CES3Q6UWW8 571 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 KCTD8Q6ZWB6 473 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 DHFR2Q86XF0 187 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 ZDHHC17Q8IUH5 632 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 LSMEM2Q8N112 164 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CBR4Q8N4T8 237 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 PCYOX1LQ8NBM8 494 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CXorf38Q8TB03 319 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 STARD8Q92502 1023 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 ATXN7L3BQ96GX2 97 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 FCRL3Q96P31 734 aaPredicted RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 FTHL17Q9BXU8 183 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 YTHDF1Q9BYJ9 559 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 UPF3AQ9H1J1 476 aaKnown RBP11.99□□□□□ -0.49
LTBR-203ENST00000441074 SRRDQ9UH36 339 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 TSPAN16Q9UKR8 245 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 GIT1Q9Y2X7 761 aa11.99□□□□□ -0.49
LTBR-203ENST00000441074 CROCCQ5TZA2 2017 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 KRBA1A5PL33 1030 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 SAC3D1A6NKF1 404 aa11.98□□□□□ -0.49
LTBR-203ENST00000441074 TRPC5OSA6NMA1 111 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms