RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 POPDC2Q9HBU9 364 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 NSMCE4AQ9NXX6 385 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 PCSK1NQ9UHG2 260 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ARHGAP26Q9UNA1 814 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SLC8A2Q9UPR5 921 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TTLL3Q9Y4R7 772 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ACTL7AQ9Y615 435 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 COL12A1Q99715 3063 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MYO16Q9Y6X6 1858 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TCRBV9S1A1TA0A576 114 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TCRBV21S2A2A0A5A6 115 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MAGEB16A2A368 324 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 H0Y626 953 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 H3BRJ5 948 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 FGF19O95750 216 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ADH1CP00326 375 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 HNRNPLP14866 589 aaKnown RBP eCLIP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CALB2P22676 271 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 IL4RP24394 825 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SLC6A4P31645 630 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SULT1E1P49888 294 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 COG7P83436 770 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CDH18Q13634 790 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC14Q15048 493 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 PAFAH1B3Q15102 231 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ZRSR2Q15696 482 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SKIDA1Q1XH10 827 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SPRED3Q2MJR0 410 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SLC25A52Q3SY17 297 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CCDC157Q569K6 752 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 FSCBQ5H9T9 825 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 KIAA1211LQ6NV74 962 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC8BQ6P9F7 803 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 LINGO4Q6UY18 593 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 OTOAQ7RTW8 1153 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TMEFF1Q8IYR6 380 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 PQLC3Q8N755 202 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 PDZD8Q8NEN9 1154 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 IRGQQ8WZA9 623 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CDKL2Q92772 493 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SKA1Q96BD8 255 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 RPRD1AQ96P16 312 aaPredicted RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 PEBP4Q96S96 227 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MYCBPQ99417 103 aaPredicted RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MYOCQ99972 504 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SPON2Q9BUD6 331 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 TTLL2Q9BWV7 592 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 CALN1Q9BXU9 219 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MYLK2Q9H1R3 596 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MRM3Q9HC36 420 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SLC2A4RGQ9NR83 387 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 GPATCH2LQ9NWQ4 482 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 SIRPGQ9P1W8 387 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 MID2Q9UJV3 735 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 STAP1Q9ULZ2 295 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 USP3Q9Y6I4 520 aa4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ASCC3Q8N3C0 2202 aaKnown RBP4.82□□□□□ -1.64
EDEM3-203ENST00000439962 ZFYVE26Q68DK2 2539 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 AKAP13Q12802 2813 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 A0A0A0MRY4 1105 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 F8W8V4 182 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 H7C0C1 242 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PLK4O00444 970 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MAP3K13O43283 966 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CREB3O43889 395 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 IFNB1P01574 187 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FYNP06241 537 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 EPHX1P07099 455 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ZSCAN5DPP0CG00 497 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 VAV1P15498 845 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CREB1P16220 341 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 L1CAMP32004 1257 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ARL4AP40617 200 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 OPRD1P41143 372 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ELK3P41970 407 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MATKP42679 507 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ATP5OP48047 213 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 DGKGP49619 791 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 STK19P49842 368 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CLCN5P51795 746 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GDF10P55107 478 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 BASP1P80723 227 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CREB5Q02930 508 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MGAT5Q09328 741 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SPEM2Q0P670 501 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 WASHC5Q12768 1159 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 DMC1Q14565 340 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CRYMQ14894 314 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FASTKD3Q14CZ7 662 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PDK1Q15118 436 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SLC1A5Q15758 541 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 KCTD19Q17RG1 926 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SMTNL2Q2TAL5 461 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SPANXN3Q5MJ09 141 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PRAMEF14Q5SWL7 426 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD22Q5VYY1 191 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms