RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CBX8Q9HC52 389 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 NCKIPSDQ9NZQ3 722 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 KLF15Q9UIH9 416 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 CLCA2Q9UQC9 943 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 BZW2Q9Y6E2 419 aaKnown RBP16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 ACACAQ13085 2346 aa16.44■□□□□ 0.22
SNRPD3-204ENST00000439775 A0A087WV48 116 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 LY6G6EA0A0G2JKS1 128 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 SYCE3A1L190 88 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 AQP9O43315 295 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 PALMO75781 387 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 SKILP12757 684 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 JUNDP17535 347 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 XPAP23025 273 aaPredicted RBP16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 PBX1P40424 430 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 DUSP3P51452 185 aaPredicted RBP16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 THOP1P52888 689 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 EIF2B5Q13144 721 aaKnown RBP16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 RTP5Q14D33 572 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 DPYSL2Q16555 572 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 ZCCHC8Q6NZY4 707 aaKnown RBP16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 LZTR1Q8N653 840 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 IQCDQ96DY2 449 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 WRAP53Q9BUR4 548 aaKnown RBP16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 ATP13A3Q9H7F0 1226 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 SP110Q9HB58 689 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 PCDH12Q9NPG4 1184 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 U3KQA8 63 aa16.43■□□□□ 0.22
SNRPD3-204ENST00000439775 NBEAQ8NFP9 2946 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 GOLGA4Q13439 2230 aaKnown RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 TPP1O14773 563 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 BUB1BO60566 1050 aaPredicted RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 NEBLO76041 1014 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 ITIH2P19823 946 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 SERPINA4P29622 427 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 MMP12P39900 470 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 RGRP47804 291 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 FANCCQ00597 558 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 IL10RBQ08334 325 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 AGERQ15109 404 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 TDRD12Q587J7 1177 aaKnown RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 ERAP2Q6P179 960 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 KDM7AQ6ZMT4 941 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 MACC1Q6ZN28 852 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 TSEN2Q8NCE0 465 aaKnown RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 ECHDC3Q96DC8 303 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 CINPQ9BW66 212 aaPredicted RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 MBNL1Q9NR56 388 aaKnown RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 MYO1AQ9UBC5 1043 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 SPASTQ9UBP0 616 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 APOBEC3BQ9UH17 382 aaKnown RBP16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 ATP8A1Q9Y2Q0 1164 aa16.42■□□□□ 0.22
SNRPD3-204ENST00000439775 H3BRJ5 948 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 DFFAO00273 331 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 C6P13671 934 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 IL1R2P27930 398 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 PEX5P50542 639 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 ZBED6P86452 979 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 NSUN2Q08J23 767 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 LRRC14Q15048 493 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 IRF4Q15306 451 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 BOLA3Q53S33 107 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 CDCP2Q5VXM1 449 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 SRLQ86TD4 932 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 ZSWIM9Q86XI8 627 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 CAMK1DQ8IU85 385 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 PHACTR4Q8IZ21 702 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 ZNF599Q96NL3 588 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 PSKH2Q96QS6 385 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 PNMA8BQ9ULN7 279 aaPredicted RBP16.41■□□□□ 0.22
SNRPD3-204ENST00000439775 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 TMEM110-MUSTN1A8MSY1 372 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 LZTS3O60299 673 aaPredicted RBP16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 OPA1O60313 960 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 MT-CO3P00414 261 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 SERPING1P05155 500 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 ARL4AP40617 200 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 UBASH3AP57075 661 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 AP1S1P61966 158 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 PIGHQ14442 188 aaPredicted RBP16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 SMTNL2Q2TAL5 461 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 WSCD2Q2TBF2 565 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 COL28A1Q2UY09 1125 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 PRRT3Q5FWE3 981 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 TMCO4Q5TGY1 634 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 C19orf48Q6RUI8 117 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 ARHGAP36Q6ZRI8 547 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 POLNQ7Z5Q5 900 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 RBFAQ8N0V3 343 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 LMX1AQ8TE12 382 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 TEKT4Q8WW24 435 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 IL12RB2Q99665 862 aa16.4■□□□□ 0.22
SNRPD3-204ENST00000439775 LRRC61Q9BV99 259 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms