RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 EFHC2Q5JST6 749 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CERCAMQ5T4B2 595 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 FBXL22Q6P050 247 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 FOXR2Q6PJQ5 311 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 OGFOD3Q6PK18 319 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 SASS6Q6UVJ0 657 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 SPRED1Q7Z699 444 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 TAC4Q86UU9 113 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 MLKLQ8NB16 471 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 OR52K2Q8NGK3 314 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 KIAA1143Q96AT1 154 aaPredicted RBP11.31□□□□□ -0.6
CSTF3-203ENST00000438862 EEF2KMTQ96G04 330 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 RPRD1AQ96P16 312 aaPredicted RBP11.31□□□□□ -0.6
CSTF3-203ENST00000438862 C1QTNF7Q9BXJ2 289 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 ASPSCR1Q9BZE9 553 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 MIS12Q9H081 205 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 MUC3BQ9H195 1237 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 ZNF768Q9H5H4 540 aaKnown RBP11.31□□□□□ -0.6
CSTF3-203ENST00000438862 ANO10Q9NW15 660 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 GGT7Q9UJ14 662 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 TRAF3IP3Q9Y228 551 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 WASF2Q9Y6W5 498 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 SPENQ96T58 3664 aaKnown RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 MKRN2OSH3BPM6 223 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 K7ERQ8 282 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 SMAD6O43541 496 aaKnown RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 RASGRP1O95267 797 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 CPNE6O95741 557 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 TRUB2O95900 331 aaKnown RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 FGF3P11487 239 aaPredicted RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 CASP1P29466 404 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 ARSDP51689 593 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 STILQ15468 1287 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 CNGA2Q16280 664 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 NFIL3Q16649 462 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 DEFB109BQ30KR1 87 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 SYPL2Q5VXT5 272 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 DPY19L3Q6ZPD9 716 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 TMPRSS9Q7Z410 1059 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 HID1Q8IV36 788 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 GUF1Q8N442 669 aaKnown RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 FAM149B1Q96BN6 582 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 ARHGEF26Q96DR7 871 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 MOCOSQ96EN8 888 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 HEPHQ9BQS7 1158 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 GPN2Q9H9Y4 310 aaPredicted RBP11.3□□□□□ -0.6
CSTF3-203ENST00000438862 LRIT1Q9P2V4 623 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 MAN1B1Q9UKM7 699 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 POLQO75417 2590 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 ESPL1Q14674 2120 aa11.3□□□□□ -0.6
CSTF3-203ENST00000438862 TTLL8A6PVC2 850 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 ZW10O43264 779 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 STX10O60499 249 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 RAD1O60671 282 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 IGLV3-25P01717 112 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 PAEPP09466 180 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 RNF224P0DH78 156 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 PRKAR1AP10644 381 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 LORP23490 312 aaPredicted RBP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 RRM1P23921 792 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 NR2F2P24468 414 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 CDH4P55283 916 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 STIM1Q13586 685 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 TRA2AQ13595 282 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 CUL2Q13617 745 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 C22orf39Q6P5X5 142 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 CCDC13Q8IYE1 715 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 PSMB7Q99436 277 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
CSTF3-203ENST00000438862 TNKS2Q9H2K2 1166 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 VPS51Q9UID3 782 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
CSTF3-203ENST00000438862 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 DUX1O43812 170 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 SNAP91O60641 907 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 HTR1BP28222 390 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 ERCC5P28715 1186 aaPredicted RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 CCR1P32246 355 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 IGFALSP35858 605 aa11.28□□□□□ -0.6
CSTF3-203ENST00000438862 RPL34P49207 117 aaKnown RBP11.28□□□□□ -0.6
CSTF3-203ENST00000438862 MXI1P50539 228 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms