RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SMTNL1A8MU46 457 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 MCIDASD6RGH6 385 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 H0YIN7 160 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 PPP1R3DO95685 299 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 GLP2RO95838 553 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 CYP3A4P08684 503 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 HARSP12081 509 aaKnown RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 FCGR1AP12314 374 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 GP1BBP13224 206 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 CYP3A7P24462 503 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 TNFSF8P32971 234 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 GRK5P34947 590 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 STAT1P42224 750 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 KIF5AQ12840 1032 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 IFIT5Q13325 482 aaKnown RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 DUSP6Q16828 381 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC35G1Q2M3R5 365 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 ARL13AQ5H913 290 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 FSCBQ5H9T9 825 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 C9orf57Q5W0N0 161 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 AAGABQ6PD74 315 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 SPSB3Q6PJ21 355 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 CREB3L2Q70SY1 520 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 ARMC9Q7Z3E5 817 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 TRABD2AQ86V40 505 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 IGFN1Q86VF2 1251 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 CCDC25Q86WR0 208 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 KLBQ86Z14 1044 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 FOXP4Q8IVH2 680 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 WDR75Q8IWA0 830 aaKnown RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM185AQ8N0U4 392 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 DCLK2Q8N568 766 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF622Q969S3 477 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 REXO5Q96IC2 774 aaKnown RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 DEFB118Q96PH6 123 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBCBQ99426 244 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 UPF3BQ9BZI7 483 aaKnown RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 B3GNT4Q9C0J1 378 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 NECTIN3Q9NQS3 549 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 MUTYHQ9UIF7 546 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 ERRFI1Q9UJM3 462 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 RAB21Q9UL25 225 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC12A4Q9UP95 1085 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM50BQ9Y247 325 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC4A4Q9Y6R1 1079 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 LRBAP50851 2863 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 NBPF19A0A087WUL8 3843 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZSWIM8A7E2V4 1837 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 DDX60LQ5H9U9 1706 aaKnown RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 DENND3A2RUS2 1198 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 MS4A18H0YCH9 400 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 PCDH17O14917 1159 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 LIASO43766 372 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZBTB11O95625 1053 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 PLGP00747 810 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 ANXA6P08133 673 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 GYS1P13807 737 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 CLCN5P51795 746 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 PMS2P54278 862 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 SEC61A1P61619 476 aaKnown RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 TRAF2Q12933 501 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 COASYQ13057 564 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 COL28A1Q2UY09 1125 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 TDRD12Q587J7 1177 aaKnown RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 ARL6IP4Q66PJ3 421 aaKnown RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 C8orf82Q6P1X6 216 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 Q6ZSV7 163 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF367Q7RTV3 350 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 CLIP4Q8N3C7 705 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 CMASQ8NFW8 434 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 BICD2Q8TD16 824 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 WDR60Q8WVS4 1066 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 BRI3BPQ8WY22 251 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 RUBCNQ92622 972 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF566Q969W8 418 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 C11orf49Q9H6J7 331 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 PGAP2Q9UHJ9 254 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 MAGED2Q9UNF1 606 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 DTX4Q9Y2E6 619 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 GAKO14976 1311 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 SALL1Q9NSC2 1324 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
HMGB1P18-201ENST00000438801 KANK1Q14678 1352 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 HIVEP3Q5T1R4 2406 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 TICRRQ7Z2Z1 1910 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 STMND1H3BQB6 276 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 VWA5AO00534 786 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 NCK2O43639 380 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 FGF18O76093 207 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 KRT10P13645 584 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 IL9P15248 144 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 CAPN2P17655 700 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 EEF1GP26641 437 aaKnown RBP3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 KLRC2P26717 231 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 RHAGQ02094 409 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 EEF1A2Q05639 463 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms