RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 ADH1CP00326 375 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 GIMD1P0DJR0 217 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 BNC1Q01954 994 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 ITGADQ13349 1161 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 UNC5AQ6ZN44 842 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 LRRC49Q8IUZ0 686 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 RAVER1Q8IY67 606 aaKnown RBP13.86□□□□□ -0.19
LRCH3-206ENST00000438796 SETD9Q8NE22 299 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 PHF10Q8WUB8 498 aaKnown RBP13.86□□□□□ -0.19
LRCH3-206ENST00000438796 LINGO1Q96FE5 620 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 SLC38A2Q96QD8 506 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 PSMD13Q9UNM6 376 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 IQCF5A8MTL0 148 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 IRF6O14896 467 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 SIRPGQ9P1W8 387 aa13.86□□□□□ -0.19
LRCH3-206ENST00000438796 CHRNGP07510 517 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 MASP1P48740 699 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PARP6Q2NL67 630 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 AFTPHQ6ULP2 937 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 STX12Q86Y82 276 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CLHC1Q8NHS4 586 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ZNF214Q9UL59 606 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 BTBD3Q9Y2F9 522 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PCDHAC2Q9Y5I4 1007 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 TNFRSF21O75509 655 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 GOT1P17174 413 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PTENP60484 403 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 DGUOKQ16854 277 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CCSAPQ6IQ19 270 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ZNF549Q6P9A3 640 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 DHRSXQ8N5I4 330 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 SMPDL3BQ92485 455 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 LMAN2LQ9H0V9 348 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 MC4RP32245 332 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 MANFP55145 182 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 SMAD3P84022 425 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ATP13A4Q4VNC1 1196 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 INO80DQ53TQ3 878 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ADHFE1Q8IWW8 467 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PRSS58Q8IYP2 241 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 STAG3L4Q8TBR4 150 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ATL1Q8WXF7 558 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 AARSD1Q9BTE6 412 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 LACRTQ9GZZ8 138 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 EHD4Q9H223 541 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 KBTBD4Q9NVX7 518 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 USP46P62068 366 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PTPRNQ16849 979 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 MZT2AQ6P582 158 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 TAF8Q7Z7C8 310 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 EXOC3L1Q86VI1 746 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 IL22Q9GZX6 179 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CNGB3Q9NQW8 809 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 TMEM216Q9P0N5 145 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PDE9AO76083 593 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ATP5F1P24539 256 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CHKAP35790 457 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ITGA1P56199 1179 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CREMQ03060 361 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 PCID2Q5JVF3 399 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 FAM46CQ5VWP2 391 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 TMPRSS11BQ86T26 416 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 UROC1Q96N76 676 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ENOPH1Q9UHY7 261 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CNOT6Q9ULM6 557 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 FGF10O15520 208 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 FKBP6O75344 327 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ZBTB11O95625 1053 aaPredicted RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ATP6V1G2O95670 118 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 APODP05090 189 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 FAM153BP0C7A2 387 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CCT3P49368 545 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 CEBPGP53567 150 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 FAM153CQ494X1 144 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 EARS2Q5JPH6 523 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 ULK3Q6PHR2 472 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
LRCH3-206ENST00000438796 C9orf16Q9BUW7 83 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 NRDE2Q9H7Z3 1164 aa13.85□□□□□ -0.19
LRCH3-206ENST00000438796 NPEPPSL1A6NEC2 478 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 ME2P23368 584 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 ITPKAP23677 461 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 CTBP1Q13363 440 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 PHYKPLQ8IUZ5 450 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 QKIQ96PU8 341 aaKnown RBP eCLIP13.84□□□□□ -0.191e-8■■■■□ 22.4
LRCH3-206ENST00000438796 CLCC1Q96S66 551 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 RIOX1Q9H6W3 641 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 ACSS2Q9NR19 701 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 MAGEB3O15480 346 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 SEPT4O43236 478 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 TPD52L2O43399 206 aaKnown RBP13.84□□□□□ -0.19
LRCH3-206ENST00000438796 MAGEC1O60732 1142 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 STX11O75558 287 aa13.84□□□□□ -0.19
LRCH3-206ENST00000438796 HGFP14210 728 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms