RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 MAP3K21Q5TCX8 1036 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 CCDC70Q6NSX1 233 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 TRILQ7L0X0 811 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 RBM23Q86U06 439 aaKnown RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 IGFN1Q86VF2 1251 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMTC1Q8IUR5 882 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 FAM185AQ8N0U4 392 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 FBXL14Q8N1E6 418 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 RBMXL3Q8N7X1 1067 aaKnown RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 RNFT2Q96EX2 444 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 CTAGE1Q96RT6 745 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 NAP1L4Q99733 375 aaKnown RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 GPR63Q9BZJ6 419 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 B3GNT4Q9C0J1 378 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 MROH8Q9H579 483 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 STN1Q9H668 368 aaKnown RBP3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 RASSF1Q9NS23 344 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 HIF1ANQ9NWT6 349 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 HSF4Q9ULV5 492 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 GDAQ9Y2T3 454 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 RAI2Q9Y5P3 530 aa3.55□□□□□ -1.84
HMGB3P12-201ENST00000438745 SBNO1A3KN83 1393 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 SAC3D1A6NKF1 404 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 LACTBL1A8MY62 500 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 INAFM1C9JVW0 142 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 PRR23D1E9PI22 279 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 RGS14O43566 566 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 SPRY3O43610 288 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 DHX16O60231 1041 aaKnown RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 CCNT1O60563 726 aaKnown RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 WDHD1O75717 1129 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 CBX6O95503 412 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 PRR23D2P0DMB1 279 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 PLA2G2AP14555 144 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 KLRC2P26717 231 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 TYK2P29597 1187 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 HOXD3P31249 432 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 HOXA11P31270 313 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 PGM1P36871 562 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 RPS6KA3P51812 740 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 OAZ1P54368 228 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZP1P60852 638 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 ABATP80404 500 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 EGR4Q05215 589 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 LTBQ06643 244 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 GOLGA8FQ08AF8 430 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 G3BP1Q13283 466 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 BYSLQ13895 437 aaKnown RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 IL13RA2Q14627 380 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 NFIL3Q16649 462 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 JAKMIP3Q5VZ66 844 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 SLC22A25Q6T423 547 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 BBS12Q6ZW61 710 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 CAMK1DQ8IU85 385 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 BRSK2Q8IWQ3 736 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 FAM217AQ8IXS0 508 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 HTRA1Q92743 480 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 TBATAQ96M53 351 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 MEIS3Q99687 375 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 TTYH1Q9H313 450 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 HIPK3Q9H422 1215 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMEM160Q9NX00 188 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 WWOXQ9NZC7 414 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 WNT16Q9UBV4 365 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 SUFUQ9UMX1 484 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 ARHGAP26Q9UNA1 814 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 LMTK2Q8IWU2 1503 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 PXDNLA1KZ92 1463 aa3.54□□□□□ -1.84
HMGB3P12-201ENST00000438745 HFM1A2PYH4 1435 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 ABCA3Q99758 1704 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 GCC2Q8IWJ2 1684 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 OR6C75A6NL08 312 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 A6NLC8 198 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 I6L893 689 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 HOXC11O43248 304 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 SH3BP5O60239 455 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 TSPAN3O60637 253 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 ATP1A3P13637 1013 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 CHRNB2P17787 502 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 GNLYP22749 145 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 GGT5P36269 586 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 LIFRP42702 1097 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 PTPN9P43378 593 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 CYP2J2P51589 502 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 MVDP53602 400 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 TLE2Q04725 743 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 POU5F1BQ06416 359 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 GPS2Q13227 327 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 NAA25Q14CX7 972 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 WDR45BQ5MNZ6 344 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 DCAF12L2Q5VW00 463 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 DENND1BQ6P3S1 775 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMEM71Q6P5X7 295 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 CCDC25Q86WR0 208 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 SPATA2LQ8IUW3 424 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 USP38Q8NB14 1042 aa3.53□□□□□ -1.84
HMGB3P12-201ENST00000438745 ELP5Q8TE02 316 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms