RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TIMMDC1Q9NPL8 285 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 MKS1Q9NXB0 559 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SCHIP1Q9P0W5 487 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CYTH4Q9UIA0 394 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 A0A0J9YYE9 177 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 BBIP1A8MTZ0 92 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 KATNA1O75449 491 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 IRF1P10914 325 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 XRCC1P18887 633 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 NDUFV1P49821 464 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 NEK2P51955 445 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DAB2P98082 770 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 IRF9Q00978 393 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 IL5RAQ01344 420 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TNK2Q07912 1038 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 FSTL1Q12841 308 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 PCLAFQ15004 111 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CCDC92Q53HC0 331 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CMPK2Q5EBM0 449 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 RNF219Q5W0B1 726 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 ESRP1Q6NXG1 681 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 PDSS2Q86YH6 399 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 GPSM1Q86YR5 675 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SFRP1Q8N474 314 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 VPS37AQ8NEZ2 397 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 LPCAT1Q8NF37 534 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 ZFAND2BQ8WV99 257 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 LPIN3Q9BQK8 851 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 HAPLN2Q9GZV7 340 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TLE6Q9H808 572 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 RMND5AQ9H871 391 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 GPBP1L1Q9HC44 474 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 OXSMQ9NWU1 459 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 GALNT8Q9NY28 637 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 BTRCQ9Y297 605 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DOCK2Q92608 1830 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 H3BNX3 289 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ARIH2O95376 493 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 AMHP03971 560 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RHOCP08134 193 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 OCM2P0CE71 109 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 OCMP0CE72 109 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 FGF3P11487 239 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ETV4P43268 484 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RAB27AP51159 221 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 LILRA4P59901 499 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 GRIK3Q13003 919 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 BFSP2Q13515 415 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SFT2D3Q587I9 215 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TTC23Q5W5X9 447 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SMYD5Q6GMV2 418 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 GLT6D1Q7Z4J2 308 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DENND6AQ8IWF6 608 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TAGAPQ8N103 731 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF276Q8N554 614 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 OR2T34Q8NGX1 318 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 OR2T3Q8NH03 318 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PIWIL1Q96J94 861 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SEMA3CQ99985 751 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CCDC106Q9BWC9 280 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 VPS45Q9NRW7 570 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 FAM32AQ9Y421 112 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 IPPQ9Y573 584 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PSAT1Q9Y617 370 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 SQORQ9Y6N5 450 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 BCORQ6W2J9 1755 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DYTNA2CJ06 578 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 A6NHS1 94 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PTGES3LE9PB15 166 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CBX4O00257 560 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 NPHS1O60500 1241 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 TSPAN3O60637 253 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PAGE1O75459 146 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF682O95780 498 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MT-CYBP00156 380 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 EGFRP00533 1210 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 IL1BP01584 269 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RPLP2P05387 115 aaKnown RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DHRS4L1P0CG22 281 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZBTB48P10074 688 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 IDO1P14902 403 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 MSH3P20585 1137 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CCNCP24863 283 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 GCAP28676 217 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ABL2P42684 1182 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 CCT8P50990 548 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 RPS6KA3P51812 740 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 IL2P60568 153 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 PRKG2Q13237 762 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 FAM187BQ17R55 369 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 ZIK1Q3SY52 487 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-205ENST00000438362 DUSP28Q4G0W2 176 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 KCTD21Q4G0X4 260 aa6.72□□□□□ -1.33
CSDE1-205ENST00000438362 HECTD2Q5U5R9 776 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms