RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 GORABQ5T7V8 394 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 C1orf228Q6PIY5 440 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 SLC44A2Q8IWA5 706 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 MCPH1Q8NEM0 835 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 OR13A1Q8NGR1 328 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 OTUD7AQ8TE49 926 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 RNF183Q96D59 192 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 C3orf30Q96M34 536 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 CSF3RQ99062 836 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 KATNAL1Q9BW62 490 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 WDR12Q9GZL7 423 aaKnown RBP3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 MYH16Q9H6N6 1097 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZNF696Q9H7X3 374 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 THAP1Q9NVV9 213 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 DDX43Q9NXZ2 648 aaKnown RBP3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 SLCO3A1Q9UIG8 710 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 RIPOR2Q9Y4F9 1068 aa3.26□□□□□ -1.89
HMGB1P31-201ENST00000437242 ARID4BQ4LE39 1312 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 COL2A1P02458 1487 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 A0A0G2JPF8 293 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 CPED1A4D0V7 1026 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 GOLGA6L3A6NEY3 463 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 HNRNPCL3B7ZW38 293 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 HNRNPCL1O60812 293 aaKnown RBP3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 CYP21A2P08686 494 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 HNRNPCL4P0DMR1 293 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 KRT5P13647 590 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 ACP5P13686 325 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 ARSAP15289 507 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 MCM3P25205 808 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 MARK3P27448 753 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 AP2B1P63010 937 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 PDCLQ13371 301 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 PTK2BQ14289 1009 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 ME3Q16798 604 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 AP5B1Q2VPB7 878 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 GRAMD1BQ3KR37 738 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 C10orf62Q5T681 223 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 KLHL17Q6TDP4 642 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 SHFQ7M4L6 423 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 MON1AQ86VX9 555 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 FSIP1Q8NA03 581 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 LNX1Q8TBB1 728 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 ARRDC2Q8TBH0 407 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 GRAPLQ8TC17 118 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 EID2BQ96D98 161 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 ARPC5LQ9BPX5 153 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 LRRC4Q9HBW1 653 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 PTPRHQ9HD43 1115 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 SLC9A2Q9UBY0 812 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 PDS5BQ9NTI5 1447 aa3.25□□□□□ -1.89
HMGB1P31-201ENST00000437242 FANCD2Q9BXW9 1451 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 CEP164Q9UPV0 1460 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 A0A087WV62 115 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 F5H423 210 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 FFAR2O15552 330 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 SLC25A17O43808 307 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 HBP1O60381 514 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 TCEA3O75764 348 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 TFPIP10646 304 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 MTNR1AP48039 350 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 ICA1Q05084 483 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZNF155Q12901 538 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 CHAF1AQ13111 956 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 BYSLQ13895 437 aaKnown RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 IL13RA2Q14627 380 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 OASLQ15646 514 aaKnown RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 FAM83BQ5T0W9 1011 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 PGBD2Q6P3X8 592 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 FAM122CQ6P4D5 195 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 SLC9B2Q86UD5 537 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 SFTPA2Q8IWL1 248 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 EXOC8Q8IYI6 725 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 CIARTQ8N365 385 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 SCAMP5Q8TAC9 235 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 NCSTNQ92542 709 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 TANKQ92844 425 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZNF501Q96CX3 271 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 TMEM19Q96HH6 336 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 CRB3Q9BUF7 120 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 RBM4Q9BWF3 364 aaKnown RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 BARHL1Q9BZE3 327 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 FBRSL1Q9HCM7 1045 aaKnown RBP3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 NOX4Q9NPH5 578 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 OBP2BQ9NPH6 170 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 PRDM8Q9NQV8 689 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 ATP8A2Q9NTI2 1148 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 ABCF3Q9NUQ8 709 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 NLKQ9UBE8 527 aa3.24□□□□□ -1.89
HMGB1P31-201ENST00000437242 KIF13AQ9H1H9 1805 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 TP53BP1Q12888 1972 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 LGALS16A8MUM7 142 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 SKAP2O75563 359 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 METTL18O95568 372 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 FGF5P12034 268 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 TIMP3P35625 211 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 GJC1P36383 396 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 IL15P40933 162 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 PTPN9P43378 593 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 HSD17B4P51659 736 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms