RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 HADHBP55084 474 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 HDAC4P56524 1084 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TUBA1BP68363 451 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ZXDBP98169 803 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 OGDHQ02218 1023 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 KRT81Q14533 505 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DHCR24Q15392 516 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ITPRIPL2Q3MIP1 535 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 SH2D4BQ5SQS7 431 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ADGRF1Q5T601 910 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 KAZNQ674X7 775 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TRIM68Q6AZZ1 485 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 CRTC1Q6UUV9 634 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TPGS1Q6ZTW0 290 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 RAPH1Q70E73 1250 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TUBA1AQ71U36 451 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 C12orf40Q86WS4 652 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 LURAP1LQ8IV03 231 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 UBALD2Q8IYN6 164 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 LGI2Q8N0V4 545 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 CPXM2Q8N436 756 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 RNF10Q8N5U6 811 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 NIPA2Q8N8Q9 360 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF557Q8N988 423 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DDI1Q8WTU0 396 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 CENPIQ92674 756 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DNASE1L2Q92874 299 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 WBP2Q969T9 261 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 NTAN1Q96AB6 310 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 RSPRY1Q96DX4 576 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TMA16Q96EY4 203 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 MSANTD3Q96H12 275 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 RBM18Q96H35 190 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ZFYVE19Q96K21 471 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 CCDC114Q96M63 670 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 RPRD1AQ96P16 312 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ALS2CR12Q96Q35 445 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ALPK1Q96QP1 1244 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 HAPLN3Q96S86 360 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 BBS2Q9BXC9 721 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 LINC00597Q9H2U6 94 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 EBF3Q9H4W6 596 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DHX35Q9H5Z1 703 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 C8orf33Q9H7E9 229 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ECT2Q9H8V3 914 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ZWILCHQ9H900 591 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 LZTFL1Q9NQ48 299 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 SPHK2Q9NRA0 654 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 SMYD2Q9NRG4 433 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 C1GALT1Q9NS00 363 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 AMFRQ9UKV5 643 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 USP18Q9UMW8 372 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 DUSP12Q9UNI6 340 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 TFR2Q9UP52 801 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 PPP2R2CQ9Y2T4 447 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 REXO2Q9Y3B8 237 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 ANAPC1Q9H1A4 1944 aa6.31□□□□□ -1.4
ECHDC1-208ENST00000436638 OBSL1O75147 1896 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 NUP210Q8TEM1 1887 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 DOCK6Q96HP0 2047 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 GOLGA6L7A0A1B0GV03 622 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 HNRNPCL2B2RXH8 293 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ALG1L2C9J202 215 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 NEDD8-MDP1E9PL57 170 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 H0Y626 953 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 KIF2AO00139 706 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 EEF2KO00418 725 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MAN2B1O00754 1011 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 TRDMT1O14717 391 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 BUB1BO60566 1050 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 HNRNPCL1O60812 293 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 TBL1XO60907 577 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 SRGAP2O75044 1071 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 LRCH4O75427 683 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 SNUPNO95149 360 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MOCS3O95396 460 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 COMTP21964 271 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ARL4AP40617 200 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 CETN2P41208 172 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 RAD52P43351 418 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 CENPAP49450 140 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 RENBPP51606 427 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF135P52742 658 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 LIMK1P53667 647 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 VCPP55072 806 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MLLT6P55198 1093 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 OXCT1P55809 520 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 TPI1P60174 286 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 CDK5R2Q13319 367 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 EIF4EBP2Q13542 120 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 INAQ16352 499 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ANKRD39Q53RE8 183 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 MS4A13Q5J8X5 152 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 PPM1JQ5JR12 505 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 LY6G5CQ5SRR4 150 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 ERMARDQ5T6L9 678 aa6.3□□□□□ -1.4
ECHDC1-208ENST00000436638 OTUD1Q5VV17 481 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms