RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TPH1P17752 444 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 KIR2DL1P43626 348 aaPredicted RBP23.19■■□□□ 1.3
CPSF4-204ENST00000436336 ENPP2Q13822 863 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 GALNT3Q14435 633 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 CASP8Q14790 479 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 UAP1Q16222 522 aaPredicted RBP23.19■■□□□ 1.3
CPSF4-204ENST00000436336 CERCAMQ5T4B2 595 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 ARMC12Q5T9G4 340 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 EMC10Q5UCC4 262 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 CCNJLQ8IV13 435 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 IGDCC3Q8IVU1 814 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 KCNV2Q8TDN2 545 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 PDCD6IPQ8WUM4 868 aaKnown RBP23.19■■□□□ 1.3
CPSF4-204ENST00000436336 STAMBPL1Q96FJ0 436 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 LRIG1Q96JA1 1093 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 ZNF641Q96N77 438 aaPredicted RBP23.19■■□□□ 1.3
CPSF4-204ENST00000436336 NAT9Q9BTE0 207 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 MTG2Q9H4K7 406 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 SORCS3Q9UPU3 1222 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 MAD1L1Q9Y6D9 718 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 ATG2BQ96BY7 2078 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 C19orf67A6NJJ6 358 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 RIPK2O43353 540 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 PGLSO95336 258 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 HLA-EP13747 358 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 RPL26P61254 145 aaKnown RBP23.19■■□□□ 1.3
CPSF4-204ENST00000436336 ARMC3Q5W041 872 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 CASC4Q6P4E1 433 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 HDXQ7Z353 690 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 PALM2Q8IXS6 379 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 RMDN1Q96DB5 314 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 SUV39H2Q9H5I1 410 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 SAMD15Q9P1V8 674 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 IL36AQ9UHA7 158 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 RPL26L1Q9UNX3 145 aaKnown RBP23.19■■□□□ 1.3
CPSF4-204ENST00000436336 PCDHB9Q9Y5E1 797 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 WASF2Q9Y6W5 498 aa23.19■■□□□ 1.3
CPSF4-204ENST00000436336 F5P12259 2224 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 MAGEB16A2A368 324 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 EGFP01133 1207 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 TSHRP16473 764 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 PRKCHP24723 683 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 CRADDP78560 199 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 TPRG1Q6ZUI0 275 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 LPCAT1Q8NF37 534 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 FAM3CQ92520 227 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 ACOX2Q99424 681 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 OSBPL1AQ9BXW6 950 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 EPB41L4BQ9H329 900 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 LRRC4CQ9HCJ2 640 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 CACNA2D2Q9NY47 1150 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 ZC3H7BQ9UGR2 993 aaKnown RBP23.18■■□□□ 1.3
CPSF4-204ENST00000436336 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.18■■□□□ 1.3
CPSF4-204ENST00000436336 STON1Q9Y6Q2 735 aa23.18■■□□□ 1.3
CPSF4-204ENST00000436336 A0A1W2PQ67 120 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 ANTXRLA6NF34 631 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 ANKRD66B4E2M5 251 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 MAN2B1O00754 1011 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 SIN3BO75182 1162 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 GRIA4P48058 902 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 MSLNQ13421 630 aaPredicted RBP23.17■■□□□ 1.3
CPSF4-204ENST00000436336 MLF2Q15773 248 aaPredicted RBP23.17■■□□□ 1.3
CPSF4-204ENST00000436336 PCID2Q5JVF3 399 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 C9orf64Q5T6V5 341 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 GDPD4Q6W3E5 623 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 CHPFQ8IZ52 775 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 ECHDC3Q96DC8 303 aa23.17■■□□□ 1.3
CPSF4-204ENST00000436336 SHISA7A6NL88 538 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 ACSL3O95573 720 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 EPHX1P07099 455 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 PGAM1P18669 254 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 TIE1P35590 1138 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 SEC13P55735 322 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 ELAVL3Q14576 367 aaKnown RBP23.16■■□□□ 1.3
CPSF4-204ENST00000436336 POU6F1Q14863 301 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 DENND2CQ68D51 928 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 PPHLN1Q8NEY8 458 aaKnown RBP23.16■■□□□ 1.3
CPSF4-204ENST00000436336 PTCD2Q8WV60 388 aaKnown RBP23.16■■□□□ 1.3
CPSF4-204ENST00000436336 PIH1D2Q8WWB5 315 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 OR8D1Q8WZ84 308 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 SPOCK2Q92563 424 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 RANBP9Q96S59 729 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 FUT8Q9BYC5 575 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 ZDHHC4Q9NPG8 344 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 SOX13Q9UN79 622 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 SPAG6O75602 509 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 LEFTY1O75610 366 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 UGT2B4P06133 528 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 GSTA2P09210 222 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 CHRM1P11229 460 aaPredicted RBP23.16■■□□□ 1.3
CPSF4-204ENST00000436336 ADRA1DP25100 572 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 EPHB1P54762 984 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 SLC29A2Q14542 456 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 QPCTQ16769 361 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 UBAP2Q5T6F2 1119 aaKnown RBP23.16■■□□□ 1.3
CPSF4-204ENST00000436336 PAF1Q8N7H5 531 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 GRIN3AQ8TCU5 1115 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 ATXN2LQ8WWM7 1075 aaKnown RBP23.16■■□□□ 1.3
CPSF4-204ENST00000436336 ZNF446Q9NWS9 450 aa23.16■■□□□ 1.3
CPSF4-204ENST00000436336 FAM237BA0A1B0GVD1 139 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms