RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 A8MT66 165 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 CCL22O00626 93 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 IPO13O94829 963 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 CRTAMO95727 393 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 HDCP19113 662 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 KPNA2P52292 529 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 RFTN1Q14699 578 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 GNASQ5JWF2 1037 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 PTAR1Q7Z6K3 402 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 TFAP2DQ7Z6R9 452 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 LDB1Q86U70 411 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 SCML4Q8N228 414 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 MARVELD2Q8N4S9 558 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 HMGCLL1Q8TB92 370 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 ANKRD49Q8WVL7 239 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 SENP6Q9GZR1 1112 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 NYNRINQ9P2P1 1898 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 TTC24A2A3L6 582 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 GLTPD2A6NH11 291 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 DENRO43583 198 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 MGEA5O60502 916 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 OR6B1O95007 311 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 MT-CO1P00395 513 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 CYP11A1P05108 521 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 OR4Q2P0C623 313 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 PABPC4LP0CB38 370 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 TSPAN8P19075 237 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 CALRP27797 417 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 CD52P31358 61 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 IRF5Q13568 498 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 GK3PQ14409 553 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 AGAP9Q5VTM2 703 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 BEND5Q7L4P6 421 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 CUZD1Q86UP6 607 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 RSPH1Q8WYR4 309 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 CNBD2Q96M20 576 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 KLHL5Q96PQ7 755 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 PCDHAC1Q9H158 963 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 NOL6Q9H6R4 1146 aaKnown RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 NT5MQ9NPB1 228 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 TBC1D13Q9NVG8 400 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 OSER1Q9NX31 292 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 CCDC167Q9P0B6 97 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 MTF2Q9Y483 593 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 PCDHGA7Q9Y5G6 932 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 AP4B1Q9Y6B7 739 aa11.89□□□□□ -0.51
CD44-209ENST00000433892 FNDC1Q4ZHG4 1894 aaPredicted RBP11.89□□□□□ -0.51
CD44-209ENST00000433892 PRSS51A0A1B0GVH4 220 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 A0A1W2PQH9 124 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 HEATR9A2RTY3 570 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 E7ENX8 843 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 J3KR12 359 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 TNFRSF10BO14763 440 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 LTA4HP09960 611 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 SMIM18P0DKX4 95 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 CD86P42081 329 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PSME3P61289 254 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 TSPY1Q01534 308 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PFKPQ01813 784 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 SATB1Q01826 763 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 CACNB2Q08289 660 aaPredicted RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 PDAP1Q13442 181 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 AGKQ53H12 422 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 C6orf52Q5T4I8 152 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 AFMIDQ63HM1 303 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 KDELC1Q6UW63 502 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 KIAA0408Q6ZU52 694 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 MRPL10Q7Z7H8 261 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 TICAM1Q8IUC6 712 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 SPATA2LQ8IUW3 424 aaPredicted RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 SCN4BQ8IWT1 228 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 DLG3Q92796 817 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PPP1R2P1Q96PQ5 205 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 SLC25A51Q9H1U9 297 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 Q9H521 79 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 PADI3Q9ULW8 664 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 Q9Y3F1 56 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 AK5Q9Y6K8 562 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 M0QZQ0 153 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 PSMD12O00232 456 aaPredicted RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 TRIM38O00635 465 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 UBDO15205 165 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 GPR182O15218 404 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 AP1G1O43747 822 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 RNASEH2AO75792 299 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 SNUPNO95149 360 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 PEX11BO96011 259 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 HTR7P34969 479 aa11.88□□□□□ -0.51
CD44-209ENST00000433892 LEPRP48357 1165 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 SERPINH1P50454 418 aaKnown RBP11.88□□□□□ -0.51
CD44-209ENST00000433892 MLLT6P55198 1093 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms