RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 IL1R2P27930 398 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 PCYT1AP49585 367 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ATP6V0D1P61421 351 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 PSMC1P62191 440 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CLDN10P78369 228 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ROR1Q01973 937 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ITGADQ13349 1161 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CUL2Q13617 745 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 NOMO1Q15155 1222 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ZACNQ401N2 412 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 HMBOX1Q6NT76 420 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SLC39A4Q6P5W5 647 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TTC33Q6PID6 262 aaPredicted RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 PACRGLQ8N7B6 248 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 RNF149Q8NC42 400 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SREK1Q8WXA9 508 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ZNF516Q92618 1163 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 USP13Q92995 863 aaPredicted RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 PABPC5Q96DU9 382 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 RTP4Q96DX8 246 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 PPP1R16BQ96T49 567 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SEMA6AQ9H2E6 1030 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 EHD1Q9H4M9 534 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CDHR5Q9HBB8 845 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TBX20Q9UMR3 447 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TCRBV3S1A0A5B6 114 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 EPOPA6NHQ4 379 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SLC16A4O15374 487 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 LRCH4O75427 683 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CLPXO76031 633 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 VAPBO95292 243 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CPNE6O95741 557 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 LSM8O95777 96 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 HLA-DRAP01903 254 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ENO3P13929 434 aaPredicted RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ZNF182P17025 639 aaPredicted RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CCNA2P20248 432 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 RPL10P27635 214 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SLC7A1P30825 629 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SSTR3P32745 418 aaPredicted RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 EFNA5P52803 228 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TMBIM6P55061 237 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 GNA12Q03113 381 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TRIM25Q14258 630 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SMTNL2Q2TAL5 461 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 LEXMQ3ZCV2 418 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 DARS2Q6PI48 645 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TMEM270Q6UE05 265 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SIX6OS1Q8N1H7 587 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ZNF786Q8N393 782 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ARFGAP1Q8N6T3 406 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 RNF148Q8N7C7 305 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CNTD1Q8N815 330 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ZNF781Q8N8C0 355 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ATP6V0D2Q8N8Y2 350 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 COLGALT1Q8NBJ5 622 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TMEM161BQ8NDZ6 487 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 MCUQ8NE86 351 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SPATA18Q8TC71 538 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SLCO4A1Q96BD0 722 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 FEM1CQ96JP0 617 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 SIGLEC10Q96LC7 697 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ZNF347Q96SE7 839 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 CIB1Q99828 191 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 TMEM175Q9BSA9 504 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 NAA50Q9GZZ1 169 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 NANOGQ9H9S0 305 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 NGRNQ9NPE2 291 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 MRPL40Q9NQ50 206 aaKnown RBP7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 RAB6BQ9NRW1 208 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 FAM105AQ9NUU6 356 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 MOCS1Q9NZB8 636 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ARHGAP28Q9P2N2 729 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 DAPK2Q9UIK4 370 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 PCDHB4Q9Y5E5 795 aa7.77□□□□□ -1.17
CNKSR3-202ENST00000433165 ANKRD34BA5PLL1 514 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 RFXAPO00287 272 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 DLGAP1O14490 977 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 TPP1O14773 563 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 CFLARO15519 480 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 MGEA5O60502 916 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 JRKO75564 520 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 CSPG5O95196 566 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 BMP2P12643 396 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 FGFR3P22607 806 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 HOXD11P31277 338 aaPredicted RBP7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 ARL2P36404 184 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 GRM5P41594 1212 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 NAMPTP43490 491 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 ZNF132P52740 706 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 NME5P56597 212 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 TRAP1Q12931 704 aaKnown RBP7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 HADHQ16836 314 aaKnown RBP7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 PAN2Q504Q3 1202 aaKnown RBP7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 PPP6R3Q5H9R7 873 aaPredicted RBP7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 INTS11Q5TA45 600 aaKnown RBP7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 GALNT18Q6P9A2 607 aa7.76□□□□□ -1.17
CNKSR3-202ENST00000433165 ZBTB49Q6ZSB9 765 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms