RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 UVRAGQ9P2Y5 699 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 SEPT3Q9UH03 358 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 PCDHGA1Q9Y5H4 931 aa17.76■□□□□ 0.43
NUP50-208ENST00000430547 GOLGA4Q13439 2230 aaKnown RBP17.76■□□□□ 0.43
NUP50-208ENST00000430547 NEMP2A6NFY4 417 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 ALPPL2P10696 532 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 DGKAP23743 735 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 SCNN1BP51168 640 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 HNRNPKP61978 463 aaKnown RBP eCLIP17.75■□□□□ 0.43
NUP50-208ENST00000430547 BCL2L1Q07817 233 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 DNAJC3Q13217 504 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 PTK2BQ14289 1009 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 UGP2Q16851 508 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 TXNRD3NBQ6F5E7 133 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 DHRS13Q6UX07 377 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 TMPRSS7Q7RTY8 843 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 KANSL1Q7Z3B3 1105 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 CAMK1DQ8IU85 385 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 VSTM4Q8IW00 320 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 KDF1Q8NAX2 398 aaPredicted RBP17.75■□□□□ 0.43
NUP50-208ENST00000430547 KLF6Q99612 283 aaPredicted RBP17.75■□□□□ 0.43
NUP50-208ENST00000430547 RCOR3Q9P2K3 495 aaPredicted RBP17.75■□□□□ 0.43
NUP50-208ENST00000430547 IGF2RP11717 2491 aa17.75■□□□□ 0.43
NUP50-208ENST00000430547 SPTY2D1-AS1A0A0U1RR47 76 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 SSU72P8A0A1W2PR75 194 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 TSPAN11A1L157 253 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 FFAR2O15552 330 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 PIAS2O75928 621 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 C1SP09871 688 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 CKMT2P17540 419 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ITIH2P19823 946 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 RGRP47804 291 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 AP1S1P61966 158 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 POLR2LP62875 67 aaKnown RBP17.74■□□□□ 0.43
NUP50-208ENST00000430547 DAB2P98082 770 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 NSUN2Q08J23 767 aaKnown RBP eCLIP17.74■□□□□ 0.43
NUP50-208ENST00000430547 TMEM52BQ4KMG9 183 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ZNF542PQ5EBM4 170 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ZFYVE27Q5T4F4 411 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 CCNI2Q6ZMN8 369 aaPredicted RBP17.74■□□□□ 0.43
NUP50-208ENST00000430547 PSKH2Q96QS6 385 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 PCDH12Q9NPG4 1184 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 GPR27Q9NS67 375 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ABHD10Q9NUJ1 306 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ETNK2Q9NVF9 386 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ZMIZ1Q9ULJ6 1067 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 NENFQ9UMX5 172 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 ATP8A1Q9Y2Q0 1164 aa17.74■□□□□ 0.43
NUP50-208ENST00000430547 BUB1BO60566 1050 aaPredicted RBP17.73■□□□□ 0.43
NUP50-208ENST00000430547 MFAP3LO75121 409 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 HNF1BP35680 557 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 HSPA9P38646 679 aaKnown RBP17.73■□□□□ 0.43
NUP50-208ENST00000430547 ACADVLP49748 655 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 SLC10A7Q0GE19 358 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 ZNF211Q13398 564 aaPredicted RBP17.73■□□□□ 0.43
NUP50-208ENST00000430547 FZD2Q14332 565 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 TP53INP2Q8IXH6 220 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 SLC25A45Q8N413 288 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 KCTD6Q8NC69 237 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 OR4C6Q8NH72 309 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 CENPTQ96BT3 561 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 CCDC42Q96M95 316 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 PACSIN1Q9BY11 444 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 UCKL1Q9NWZ5 548 aa17.73■□□□□ 0.43
NUP50-208ENST00000430547 MYLKQ15746 1914 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.72■□□□□ 0.43
NUP50-208ENST00000430547 TOR1BO14657 336 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 RIOK3O14730 519 aaKnown RBP17.72■□□□□ 0.43
NUP50-208ENST00000430547 SIGLEC6O43699 453 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 LZTS3O60299 673 aaPredicted RBP17.72■□□□□ 0.43
NUP50-208ENST00000430547 PROSCO94903 275 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 CSF2P04141 144 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 KRT7P08729 469 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 C6P13671 934 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 NME1P15531 152 aaKnown RBP17.72■□□□□ 0.43
NUP50-208ENST00000430547 IGFALSP35858 605 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 MMP12P39900 470 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
NUP50-208ENST00000430547 PFN3P60673 137 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 YPEL5P62699 121 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 ILKQ13418 452 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 LRRC14Q15048 493 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 SMAD1Q15797 465 aaKnown RBP17.72■□□□□ 0.43
NUP50-208ENST00000430547 CNGA4Q8IV77 575 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 MAP7D3Q8IWC1 876 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 TSC1Q92574 1164 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 ANP32EQ9BTT0 268 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 SCUBE2Q9NQ36 999 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 EVA1BQ9NVM1 165 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 NLGN3Q9NZ94 848 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 COQ6Q9Y2Z9 468 aa17.72■□□□□ 0.43
NUP50-208ENST00000430547 TMEM110-MUSTN1A8MSY1 372 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 TRIM38O00635 465 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 MUSKO15146 869 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 MAFKO60675 156 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 PRKCGP05129 697 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 TMEM253P0C7T8 217 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 JUNDP17535 347 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 NFKBIAP25963 317 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms