RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 AGAP3Q96P47 875 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 CEP41Q9BYV8 373 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 SLC25A51Q9H1U9 297 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 PCDHGC4Q9Y5F7 938 aa20.25■□□□□ 0.83
CSNK1E-207ENST00000430335 RNGTTO60942 597 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 XPAP23025 273 aaPredicted RBP20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 CD27P26842 260 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 PPP2CBP62714 309 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 PPP2CAP67775 309 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 ELP6Q0PNE2 266 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 SLC14A2Q15849 920 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 KIAA1161Q6NSJ0 714 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 DARS2Q6PI48 645 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 RABEPKQ7Z6M1 372 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 HORMAD1Q86X24 394 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 RGL4Q8IZJ4 473 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 SLC35B2Q8TB61 432 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 FEM1CQ96JP0 617 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 PBKQ96KB5 322 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 FAM118BQ9BPY3 351 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 ORAI3Q9BRQ5 295 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 GLOD4Q9HC38 313 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 VPS45Q9NRW7 570 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 TMEM74BQ9NUR3 256 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 SUSD2Q9UGT4 822 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 TRHDEQ9UKU6 1024 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 R3HDM2Q9Y2K5 976 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 RAI2Q9Y5P3 530 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 GON4LQ3T8J9 2241 aa20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 RIF1Q5UIP0 2472 aaKnown RBP20.24■□□□□ 0.83
CSNK1E-207ENST00000430335 A0A1W2PPC4 97 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 FZD6O60353 706 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 PCDH8O95206 1070 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 PGLSO95336 258 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 MMP2P08253 660 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 CA4P22748 312 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 SKOR1P84550 965 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 IHHQ14623 411 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 ARMC12Q5T9G4 340 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 ERAP2Q6P179 960 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 PRPF39Q86UA1 669 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 ZNF567Q8N184 647 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 C1orf216Q8TAB5 229 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 CEP76Q8TAP6 659 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 MAIP1Q8WWC4 291 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 SNX19Q92543 992 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 TADA1Q96BN2 335 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 IMP4Q96G21 291 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 PCDH12Q9NPG4 1184 aa20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 KLHL8Q9P2G9 620 aaPredicted RBP20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 EIF2B4Q9UI10 523 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 ZFR2Q9UPR6 939 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-207ENST00000430335 EP300Q09472 2414 aaPredicted RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 A0A1W2PQU0 124 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 NEMP1O14524 444 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 RIOK3O14730 519 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 CEP104O60308 925 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 CPP00450 1065 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 ATP1A1P05023 1023 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 MAOBP27338 520 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 CXCR5P32302 372 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 CD68P34810 354 aaPredicted RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 CD86P42081 329 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 RPS21P63220 83 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 TMEM52BQ4KMG9 183 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 TMEM259Q4ZIN3 620 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 GPR161Q8N6U8 529 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 PAF1Q8N7H5 531 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 HINFPQ9BQA5 517 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 TDRD1Q9BXT4 1180 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 C10orf88Q9H8K7 445 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 EBF2Q9HAK2 575 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 USP29Q9HBJ7 922 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 PHTF1Q9UMS5 762 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 DMTF1Q9Y222 760 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 ITM2BQ9Y287 266 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 ZKSCAN5Q9Y2L8 839 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 PPIL1Q9Y3C6 166 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 PCDHB9Q9Y5E1 797 aa20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 TNRC6BQ9UPQ9 1833 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-207ENST00000430335 KCNN4O15554 427 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 FGGP02679 453 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 ZNF806P0C7X5 589 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 GNSP15586 552 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 TGM1P22735 817 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 NFKBIAP25963 317 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 MMP12P39900 470 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 RPL26P61254 145 aaKnown RBP20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 SPEM2Q0P670 501 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 SIX1Q15475 284 aaPredicted RBP20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 CSRP2Q16527 193 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 DUOXA1Q1HG43 343 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 ZNF284Q2VY69 593 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 SETMARQ53H47 684 aaPredicted RBP20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 LRRC73Q5JTD7 316 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 PID1Q7Z2X4 250 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 RASGEF1CQ8N431 466 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 DCLK2Q8N568 766 aa20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.21■□□□□ 0.83
CSNK1E-207ENST00000430335 PDCD6IPQ8WUM4 868 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms