RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 IL23RQ5VWK5 629 aa12.72□□□□□ -0.37
CPNE4-201ENST00000429747 CENPLQ8N0S6 344 aaPredicted RBP12.72□□□□□ -0.37
CPNE4-201ENST00000429747 CLYBLQ8N0X4 340 aa12.72□□□□□ -0.37
CPNE4-201ENST00000429747 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
CPNE4-201ENST00000429747 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
CPNE4-201ENST00000429747 DACH2Q96NX9 599 aa12.72□□□□□ -0.37
CPNE4-201ENST00000429747 UNC93B1Q9H1C4 597 aa12.72□□□□□ -0.37
CPNE4-201ENST00000429747 DNAJA2O60884 412 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 OCM2P0CE71 109 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 OCMP0CE72 109 aaPredicted RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 COL6A2P12110 1019 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 AKT1P31749 480 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 PPM1FP49593 454 aaPredicted RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 PSEN2P49810 448 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 LILRA4P59901 499 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 HFE2Q6ZVN8 426 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 OLIG1Q8TAK6 271 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 FBXO30Q8TB52 745 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 TEPSINQ96N21 525 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 OLA1Q9NTK5 396 aaKnown RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 SCN3BQ9NY72 215 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 CACNG4Q9UBN1 327 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 CPA4Q9UI42 421 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 EIF3LQ9Y262 564 aaKnown RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 NRCAMQ92823 1304 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 AZIN1O14977 448 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 DARSP14868 501 aaKnown RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 GLUD2P49448 558 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 IL5RAQ01344 420 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 VAC14Q08AM6 782 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 LPIN1Q14693 890 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 TIGD2Q4W5G0 525 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 EPGNQ6UW88 154 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 KBTBD2Q8IY47 623 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 TMEM86AQ8N2M4 240 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 LPCAT1Q8NF37 534 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 ITFG1Q8TB96 612 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 SNX27Q96L92 541 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 TEKT5Q96M29 485 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 DHRS4Q9BTZ2 278 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 DERAQ9Y315 318 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 IPPQ9Y573 584 aa12.71□□□□□ -0.37
CPNE4-201ENST00000429747 COPG1Q9Y678 874 aaKnown RBP12.71□□□□□ -0.37
CPNE4-201ENST00000429747 MYBPHLA2RUH7 354 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 F5H5T6 163 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 TP73O15350 636 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 CCNIQ14094 377 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF618Q5T7W0 954 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 REP15Q6BDI9 236 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 PAOXQ6QHF9 649 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 LRRC8DQ7L1W4 858 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.38
CPNE4-201ENST00000429747 ZDHHC13Q8IUH4 622 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 PPTC7Q8NI37 304 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 SERPINB11Q96P15 392 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 SLC39A3Q9BRY0 314 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 COMMD8Q9NX08 183 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 ZMYM5Q9UJ78 669 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 GLI3P10071 1580 aa12.71□□□□□ -0.38
CPNE4-201ENST00000429747 CBX4O00257 560 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 PAGE1O75459 146 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF682O95780 498 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CDH2P19022 906 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 TRPC1P48995 793 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 ABRAXAS1Q6UWZ7 409 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 P3H2Q8IVL5 708 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 LZICQ8WZA0 190 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 SEMA3CQ99985 751 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 COL4A1P02462 1669 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 FGF10O15520 208 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 DLX3O60479 287 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HARS2P49590 506 aaKnown RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 INCA1Q0VD86 236 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 ITGADQ13349 1161 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 DPYSQ14117 519 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HECTD2Q5U5R9 776 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 TOP6BLQ8N6T0 577 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 DCBLD1Q8N8Z6 715 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 MOCS1Q9NZB8 636 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 FADS3Q9Y5Q0 445 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 EVPLLA8MZ36 301 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 GPR182O15218 404 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HS6ST1O60243 411 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 STBD1O95210 358 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 BRCC3P46736 316 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 MTTPP55157 894 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CDH15P55291 814 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF280AP59817 542 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 DDX39BQ13838 428 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms