RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CCR4P51679 360 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 ZCCHC9Q8N567 271 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 TNIP2Q8NFZ5 429 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 WFIKKN2Q8TEU8 576 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 MTMR11A4FU01 709 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.344e-6■□□□□ 11.1
SMARCA4-203ENST00000429416 PPP2R1BP30154 601 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 AQP5P55064 265 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 CCDC153Q494R4 210 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 ADGRF1Q5T601 910 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 MBLAC2Q68D91 279 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 MON1BQ7L1V2 547 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 OR9Q1Q8NGQ5 310 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 VPS45Q9NRW7 570 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 OR2AG2A6NM03 316 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 CHRNA1P02708 482 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 GTF2E2P29084 291 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 PTPN9P43378 593 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 ANO7Q6IWH7 933 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 SYBUQ9NX95 663 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 BANF1O75531 89 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 RGS20O76081 388 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ITGAVP06756 1048 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 EDNRBP24530 442 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 SLC20A2Q08357 652 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 CMTM8Q8IZV2 173 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ZBED3Q96IU2 234 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 CES2O00748 559 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ATG13O75143 517 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 GUCY1B2O75343 617 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ALPPL2P10696 532 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 SEC24CP53992 1094 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 POU5F1Q01860 360 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 DNAL1Q4LDG9 190 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 CERCAMQ5T4B2 595 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 CHMP1BQ7LBR1 199 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 RTL3Q8N8U3 475 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 B4GALNT2Q8NHY0 566 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 EPN3Q9H201 632 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 PIF1Q9H611 641 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 TNPO3Q9Y5L0 923 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 A0A087X1B8 175 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 A0A0U1RQJ8 604 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 A0A1W2PQ67 120 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 M0R2N6 131 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 TPST1O60507 370 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 SEC24DO94855 1032 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 SF1Q15637 639 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 DNAJC1Q96KC8 554 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ANKRD6Q9Y2G4 727 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 NDST3O95803 873 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 LTA4HP09960 611 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 KCNQ1P51787 676 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 PRKAG1P54619 331 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ECT2LQ008S8 904 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 CHST15Q7LFX5 561 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ZDHHC4Q9NPG8 344 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 FBXO5Q9UKT4 447 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 KIAA0100Q14667 2235 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ASLP04424 464 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 CLCN5P51795 746 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 ZCWPW2Q504Y3 356 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 SYPL2Q5VXT5 272 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 C16orf46Q6P387 395 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 OR52K2Q8NGK3 314 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 DACH2Q96NX9 599 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 PSME2Q9UL46 239 aa17.19■□□□□ 0.34
SMARCA4-203ENST00000429416 RCCD1A6NED2 376 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 TPP1O14773 563 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 UBDO15205 165 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 AVILO75366 819 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 CDH2P19022 906 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 DNAJC14Q6Y2X3 702 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 SYT12Q8IV01 421 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 HOMEZQ8IX15 550 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 DEFB119Q8N690 84 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 UBE2E3Q969T4 207 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 GPR62Q9BZJ7 368 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 RCOR3Q9P2K3 495 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 RABGEF1Q9UJ41 708 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 FBXW11Q9UKB1 542 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 KRT87PA6NCN2 255 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 FFAR3O14843 346 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 GPR42O15529 346 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 OR10H2O60403 315 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 POTEHQ6S545 545 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 AGMOQ6ZNB7 445 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 CMTR2Q8IYT2 770 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 NDEL1Q9GZM8 345 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 C5orf60A6NFR6 353 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 SLCO1B7G3V0H7 640 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 H3BM21 787 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 GCATO75600 419 aa17.18■□□□□ 0.34
SMARCA4-203ENST00000429416 PDE1CQ14123 709 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms