RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ALPPL2P10696 532 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 HSPA9P38646 679 aaKnown RBP20.85■□□□□ 0.93
HSPG2-205ENST00000427897 HNRNPKP61978 463 aaKnown RBP eCLIP20.85■□□□□ 0.93
HSPG2-205ENST00000427897 MMRN1Q13201 1228 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 PDE1CQ14123 709 aaPredicted RBP20.85■□□□□ 0.93
HSPG2-205ENST00000427897 PTK2BQ14289 1009 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 PDK2Q15119 407 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 ZNF542PQ5EBM4 170 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 MARC1Q5VT66 337 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 TP53INP2Q8IXH6 220 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 GALNT15Q8N3T1 639 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 SLC35G2Q8TBE7 412 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 PDCD6IPQ8WUM4 868 aaKnown RBP20.85■□□□□ 0.93
HSPG2-205ENST00000427897 PCDH12Q9NPG4 1184 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 SCUBE2Q9NQ36 999 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 HAUS2Q9NVX0 235 aa20.85■□□□□ 0.93
HSPG2-205ENST00000427897 NCOR2Q9Y618 2525 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 NEMP2A6NFY4 417 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 C1QTNF9BB2RNN3 333 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 BUB1BO60566 1050 aaPredicted RBP20.84■□□□□ 0.93
HSPG2-205ENST00000427897 C1QTNF9P0C862 333 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 RGRP47804 291 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 AP1S1P61966 158 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 ITKQ08881 620 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 SLC10A7Q0GE19 358 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 ASTE1Q2TB18 679 aaPredicted RBP20.84■□□□□ 0.93
HSPG2-205ENST00000427897 TMEM52BQ4KMG9 183 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 ATP13A4Q4VNC1 1196 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 RHOT2Q8IXI1 618 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 IFT43Q96FT9 208 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 PSKH2Q96QS6 385 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 NENFQ9UMX5 172 aa20.84■□□□□ 0.93
HSPG2-205ENST00000427897 RIOK3O14730 519 aaKnown RBP20.83■□□□□ 0.93
HSPG2-205ENST00000427897 FFAR2O15552 330 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 PROS1P07225 676 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 CD48P09326 243 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 DGKAP23743 735 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 NFKBIAP25963 317 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 DAB2P98082 770 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 LRRC49Q8IUZ0 686 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 KLF6Q99612 283 aaPredicted RBP20.83■□□□□ 0.93
HSPG2-205ENST00000427897 ATP8A1Q9Y2Q0 1164 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 COQ6Q9Y2Z9 468 aa20.83■□□□□ 0.93
HSPG2-205ENST00000427897 SPTY2D1-AS1A0A0U1RR47 76 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 A0A1W2PQ67 120 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 MAFKO60675 156 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 CDK4P11802 303 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 ARHGAP25P42331 645 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 MMP13P45452 471 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 LIG3P49916 1009 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 YPEL5P62699 121 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 DNAJC3Q13217 504 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 DPYSL3Q14195 570 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 LRRC14Q15048 493 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 ANKRD20A8PQ5CZ79 823 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 TIGD7Q6NT04 549 aaPredicted RBP20.82■□□□□ 0.92
HSPG2-205ENST00000427897 PARGQ86W56 976 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 SLC22A18ASQ8N1D0 253 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 BTN2A2Q8WVV5 523 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 TSC1Q92574 1164 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 ZNF670Q9BS34 389 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 MAK16Q9BXY0 300 aaKnown RBP20.82■□□□□ 0.92
HSPG2-205ENST00000427897 EVA1BQ9NVM1 165 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 TOR4AQ9NXH8 423 aa20.82■□□□□ 0.92
HSPG2-205ENST00000427897 TSPAN11A1L157 253 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 SPINT1O43278 529 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 RFPL3O75679 317 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 PIAS2O75928 621 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 PRKCGP05129 697 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 C1SP09871 688 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 CKMT2P17540 419 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 MAN1A1P33908 653 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 TAS2R40P59535 323 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 SEMG2Q02383 582 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 DHRS13Q6UX07 377 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.81■□□□□ 0.92
HSPG2-205ENST00000427897 VOPP1Q96AW1 172 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 CENPTQ96BT3 561 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 ZNF830Q96NB3 372 aaPredicted RBP20.81■□□□□ 0.92
HSPG2-205ENST00000427897 NUDCD1Q96RS6 583 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 NT5MQ9NPB1 228 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 PCDHGC4Q9Y5F7 938 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 PCDHGA1Q9Y5H4 931 aa20.81■□□□□ 0.92
HSPG2-205ENST00000427897 COL5A1P20908 1838 aaPredicted RBP20.81■□□□□ 0.92
HSPG2-205ENST00000427897 TTC24A2A3L6 582 aaPredicted RBP20.8■□□□□ 0.92
HSPG2-205ENST00000427897 TMEM8BA6NDV4 472 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 A8MX80 341 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 TOR1BO14657 336 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 ELFN1P0C7U0 828 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 C6P13671 934 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 TNNT1P13805 278 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 JUNDP17535 347 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 IL4RP24394 825 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 IGFALSP35858 605 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 NOP2P46087 812 aaKnown RBP20.8■□□□□ 0.92
HSPG2-205ENST00000427897 PFN3P60673 137 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 MAXP61244 160 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 ZNF211Q13398 564 aaPredicted RBP20.8■□□□□ 0.92
HSPG2-205ENST00000427897 FZD2Q14332 565 aa20.8■□□□□ 0.92
HSPG2-205ENST00000427897 PAFAH1B3Q15102 231 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms