RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ATP13A3Q9H7F0 1226 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 SCUBE2Q9NQ36 999 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 LCMT1Q9UIC8 334 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 SALL4Q9UJQ4 1053 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 PCOLCE2Q9UKZ9 415 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 REXO2Q9Y3B8 237 aaKnown RBP15.01□□□□□ -0.01
RTN4-210ENST00000427710 EPN1Q9Y6I3 576 aaPredicted RBP15.01□□□□□ -0.01
RTN4-210ENST00000427710 TSPAN11A1L157 253 aa15□□□□□ -0.01
RTN4-210ENST00000427710 C3orf70A6NLC5 250 aaPredicted RBP15□□□□□ -0.01
RTN4-210ENST00000427710 GOLGA8CPA6NN73 597 aa15□□□□□ -0.01
RTN4-210ENST00000427710 A8MX80 341 aa15□□□□□ -0.01
RTN4-210ENST00000427710 SPOPO43791 374 aa15□□□□□ -0.01
RTN4-210ENST00000427710 SDC3O75056 442 aa15□□□□□ -0.01
RTN4-210ENST00000427710 CBFA2T3O75081 653 aa15□□□□□ -0.01
RTN4-210ENST00000427710 NDUFA10O95299 355 aa15□□□□□ -0.01
RTN4-210ENST00000427710 FECHP22830 423 aa15□□□□□ -0.01
RTN4-210ENST00000427710 GARSP41250 739 aaKnown RBP15□□□□□ -0.01
RTN4-210ENST00000427710 MMP13P45452 471 aa15□□□□□ -0.01
RTN4-210ENST00000427710 RENBPP51606 427 aa15□□□□□ -0.01
RTN4-210ENST00000427710 BCL2L1Q07817 233 aa15□□□□□ -0.01
RTN4-210ENST00000427710 GALNT2Q10471 571 aa15□□□□□ -0.01
RTN4-210ENST00000427710 SPA17Q15506 151 aa15□□□□□ -0.01
RTN4-210ENST00000427710 TRIP6Q15654 476 aaKnown RBP15□□□□□ -0.01
RTN4-210ENST00000427710 UGP2Q16851 508 aa15□□□□□ -0.01
RTN4-210ENST00000427710 ZNF542PQ5EBM4 170 aa15□□□□□ -0.01
RTN4-210ENST00000427710 Q6ZSR6 202 aa15□□□□□ -0.01
RTN4-210ENST00000427710 B4GALNT4Q76KP1 1039 aa15□□□□□ -0.01
RTN4-210ENST00000427710 RFX6Q8HWS3 928 aa15□□□□□ -0.01
RTN4-210ENST00000427710 PNPLA1Q8N8W4 532 aa15□□□□□ -0.01
RTN4-210ENST00000427710 PDCD6IPQ8WUM4 868 aaKnown RBP15□□□□□ -0.01
RTN4-210ENST00000427710 PSKH2Q96QS6 385 aa15□□□□□ -0.01
RTN4-210ENST00000427710 TUBGCP5Q96RT8 1024 aa15□□□□□ -0.01
RTN4-210ENST00000427710 KLF6Q99612 283 aaPredicted RBP15□□□□□ -0.01
RTN4-210ENST00000427710 C1QTNF2Q9BXJ5 285 aa15□□□□□ -0.01
RTN4-210ENST00000427710 NOD2Q9HC29 1040 aa15□□□□□ -0.01
RTN4-210ENST00000427710 PCDHGC4Q9Y5F7 938 aa15□□□□□ -0.01
RTN4-210ENST00000427710 PCDHGB2Q9Y5G2 931 aa15□□□□□ -0.01
RTN4-210ENST00000427710 ASXL3Q9C0F0 2248 aa15□□□□□ -0.01
RTN4-210ENST00000427710 ACACBO00763 2458 aa15□□□□□ -0.01
RTN4-210ENST00000427710 MAP1BP46821 2468 aaKnown RBP15□□□□□ -0.01
RTN4-210ENST00000427710 MYLKQ15746 1914 aa15□□□□□ -0.01
RTN4-210ENST00000427710 RIOK3O14730 519 aaKnown RBP14.99□□□□□ -0.01
RTN4-210ENST00000427710 TM7SF2O76062 418 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 CR2P20023 1033 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 PMLP29590 882 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 SERPINA4P29622 427 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 IGFALSP35858 605 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 MARCKSL1P49006 195 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 DYNLT1P63172 113 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 ITKQ08881 620 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 NSUN2Q08J23 767 aaKnown RBP eCLIP14.99□□□□□ -0.01
RTN4-210ENST00000427710 TRAF2Q12933 501 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 GRM3Q14832 879 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 SUZ12Q15022 739 aaKnown RBP14.99□□□□□ -0.01
RTN4-210ENST00000427710 TCEAL1Q15170 157 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 PTPRRQ15256 657 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 TMEM52BQ4KMG9 183 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 TPRG1LQ5T0D9 272 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 MARC1Q5VT66 337 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 MFSD7Q6UXD7 560 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 DBX2Q6ZNG2 339 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 IQCHQ86VS3 1027 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 TMTC1Q8IUR5 882 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 SLC22A18ASQ8N1D0 253 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 PLD5Q8N7P1 536 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 NSMCE1Q8WV22 266 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 ZNF641Q96N77 438 aaPredicted RBP14.99□□□□□ -0.01
RTN4-210ENST00000427710 MGME1Q9BQP7 344 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 MBNL1Q9NR56 388 aaKnown RBP14.99□□□□□ -0.01
RTN4-210ENST00000427710 DTLQ9NZJ0 730 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 ATP8A1Q9Y2Q0 1164 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 TTLL3Q9Y4R7 772 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 HEY1Q9Y5J3 304 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 HS3ST3A1Q9Y663 406 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 ALG6Q9Y672 507 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 DUSP10Q9Y6W6 482 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 LRP4O75096 1905 aa14.99□□□□□ -0.01
RTN4-210ENST00000427710 ARHGEF17Q96PE2 2063 aaPredicted RBP14.99□□□□□ -0.01
RTN4-210ENST00000427710 RP1P56715 2156 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 A0A0U1RQJ8 604 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 A6NNZ2 444 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 TRAFD1O14545 582 aaPredicted RBP14.98□□□□□ -0.01
RTN4-210ENST00000427710 FLRT2O43155 660 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 MAGEC1O60732 1142 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 ITGAVP06756 1048 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 EPHA8P29322 1005 aaPredicted RBP14.98□□□□□ -0.01
RTN4-210ENST00000427710 SLC1A1P43005 524 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 IFI16Q16666 785 aaKnown RBP14.98□□□□□ -0.01
RTN4-210ENST00000427710 CCDC157Q569K6 752 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 ABI3BPQ7Z7G0 1075 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 SLCO6A1Q86UG4 719 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 RHOT1Q8IXI2 618 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 BBS5Q8N3I7 341 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 TEX26Q8N6G2 289 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 EID2Q8N6I1 236 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 CCNYQ8ND76 341 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.98□□□□□ -0.01
RTN4-210ENST00000427710 HCAR2Q8TDS4 363 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 SAP25Q8TEE9 199 aa14.98□□□□□ -0.01
RTN4-210ENST00000427710 ECHDC3Q96DC8 303 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms