RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 NIPA2Q8N8Q9 360 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 TSEN2Q8NCE0 465 aaKnown RBP10.28□□□□□ -0.76
COMMD1-202ENST00000427417 TEKT4Q8WW24 435 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 HSPH1Q92598 858 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 VOPP1Q96AW1 172 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 CENPTQ96BT3 561 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 ZNF599Q96NL3 588 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 THAP2Q9H0W7 228 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.28□□□□□ -0.76
COMMD1-202ENST00000427417 NCKIPSDQ9NZQ3 722 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 CWC15Q9P013 229 aaKnown RBP10.28□□□□□ -0.76
COMMD1-202ENST00000427417 DKK4Q9UBT3 224 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 GGT7Q9UJ14 662 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 ANAPC7Q9UJX3 599 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 APC2O95996 2303 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 CELSR3Q9NYQ7 3312 aa10.28□□□□□ -0.76
COMMD1-202ENST00000427417 PKD1L2Q7Z442 2459 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 ACACAQ13085 2346 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 A0A1W2PQ67 120 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TSPAN11A1L157 253 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TRABD2BA6NFA1 517 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 MYO1FO00160 1098 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TRIM38O00635 465 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 INSIG1O15503 277 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 FFAR2O15552 330 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 SPINT1O43278 529 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 CBFA2T2O43439 604 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 GYPCP04921 128 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 CYP1A2P05177 515 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TPM1P09493 284 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 NME1P15531 152 aaKnown RBP10.27□□□□□ -0.77
COMMD1-202ENST00000427417 JUNDP17535 347 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 NFKBIAP25963 317 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 PEX5P50542 639 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 AP1S1P61966 158 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 BCL2L1Q07817 233 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TRIM14Q14142 442 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 FZD2Q14332 565 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 LRRC14Q15048 493 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 HADHQ16836 314 aaKnown RBP10.27□□□□□ -0.77
COMMD1-202ENST00000427417 SMTNL2Q2TAL5 461 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 LRRC73Q5JTD7 316 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 CCDC122Q5T0U0 273 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 C19orf48Q6RUI8 117 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 POLNQ7Z5Q5 900 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 SRLQ86TD4 932 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 CACTIN-AS1Q8N1I8 211 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 NPWQ8N729 165 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 FAM181AQ8N9Y4 354 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 ZNF548Q8NEK5 533 aaPredicted RBP10.27□□□□□ -0.77
COMMD1-202ENST00000427417 NSMCE1Q8WV22 266 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 TBATAQ96M53 351 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 PSKH2Q96QS6 385 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 WRAP53Q9BUR4 548 aaKnown RBP10.27□□□□□ -0.77
COMMD1-202ENST00000427417 NUP85Q9BW27 656 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 UCKL1Q9NWZ5 548 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 RCOR3Q9P2K3 495 aaPredicted RBP10.27□□□□□ -0.77
COMMD1-202ENST00000427417 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 LCMT1Q9UIC8 334 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 ATP8A1Q9Y2Q0 1164 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 CSNK1G3Q9Y6M4 447 aa10.27□□□□□ -0.77
COMMD1-202ENST00000427417 KNTC1P50748 2209 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 FREM2Q5SZK8 3169 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 A0A087X0T9 212 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CFAP69A5D8W1 941 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 AQP9O43315 295 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 GP1BAP07359 652 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 FAM228BP0C875 321 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 RARAP10276 462 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CKMT1AP12532 417 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 HOXB3P14651 431 aaPredicted RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 IL1R2P27930 398 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 HTR1BP28222 390 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CASP14P31944 242 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 IGFALSP35858 605 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 HSPA9P38646 679 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 SSR1P43307 286 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 BLKP51451 505 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 KRT81Q14533 505 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 ZNF235Q14590 738 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 LBRQ14739 615 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 TSR1Q2NL82 804 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 ZNF542PQ5EBM4 170 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 HES3Q5TGS1 186 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 ZCCHC8Q6NZY4 707 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 MACC1Q6ZN28 852 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CAMK1DQ8IU85 385 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 LRRC49Q8IUZ0 686 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 ATL2Q8NHH9 583 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 GLMNQ92990 594 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 ECHDC3Q96DC8 303 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 NXPE2Q96DL1 559 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CSPG4P5Q96PW8 444 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 SLC13A1Q9BZW2 595 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms