RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 APOBEC3BQ9UH17 382 aaKnown RBP10.16□□□□□ -0.78
GACAT3-201ENST00000426539 COQ6Q9Y2Z9 468 aa10.16□□□□□ -0.78
GACAT3-201ENST00000426539 ENTPD2Q9Y5L3 495 aa10.16□□□□□ -0.78
GACAT3-201ENST00000426539 COL27A1Q8IZC6 1860 aaPredicted RBP10.16□□□□□ -0.78
GACAT3-201ENST00000426539 SMG1Q96Q15 3661 aaKnown RBP10.16□□□□□ -0.78
GACAT3-201ENST00000426539 PTPRQQ9UMZ3 2332 aa10.16□□□□□ -0.78
GACAT3-201ENST00000426539 TDRD6O60522 2096 aaKnown RBP10.15□□□□□ -0.78
GACAT3-201ENST00000426539 TSPAN11A1L157 253 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 LRRC10BA6NIK2 292 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 LMO7DNF2Z398 122 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 J3KR12 359 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 YY2O15391 372 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 BUB1BO60566 1050 aaPredicted RBP10.15□□□□□ -0.78
GACAT3-201ENST00000426539 IGSF6O95976 241 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 TSHRP16473 764 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 EIF4A3P38919 411 aaKnown RBP10.15□□□□□ -0.78
GACAT3-201ENST00000426539 RGRP47804 291 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 THOP1P52888 689 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 PDX1P52945 283 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 YPEL5P62699 121 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 PTK2BQ14289 1009 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 IRF4Q15306 451 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 NR0B2Q15466 257 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 CA9Q16790 459 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 WSCD2Q2TBF2 565 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 PARP15Q460N3 678 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 EFHC2Q5JST6 749 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 C6orf132Q5T0Z8 1188 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 KCTD16Q68DU8 428 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ACAD10Q6JQN1 1059 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 DNAJC24Q6P3W2 148 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 MACC1Q6ZN28 852 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 GPR155Q7Z3F1 870 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ZNF354CQ86Y25 554 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 MCOLN2Q8IZK6 566 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ARFGAP1Q8N6T3 406 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ZNF248Q8NDW4 579 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 NEK11Q8NG66 645 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 CXorf40AQ8TE69 158 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 BTN2A2Q8WVV5 523 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ARHGEF26Q96DR7 871 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ATXN7L3BQ96GX2 97 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 TBATAQ96M53 351 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 ERGIC2Q96RQ1 377 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 IL12RB2Q99665 862 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 CNPY3Q9BT09 278 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 CPEB1Q9BZB8 566 aaKnown RBP10.15□□□□□ -0.78
GACAT3-201ENST00000426539 SEPT11Q9NVA2 429 aaKnown RBP10.15□□□□□ -0.78
GACAT3-201ENST00000426539 GPATCH2LQ9NWQ4 482 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 SATB2Q9UPW6 733 aa10.15□□□□□ -0.78
GACAT3-201ENST00000426539 EIF4E1BA6NMX2 242 aaKnown RBP10.14□□□□□ -0.79
GACAT3-201ENST00000426539 TK2O00142 265 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 TOR1BO14657 336 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 MUSKO15146 869 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 PRAMEF11O60813 436 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 PRKCGP05129 697 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 TPM2P07951 284 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 PCBP4P57723 403 aaKnown RBP10.14□□□□□ -0.79
GACAT3-201ENST00000426539 ERVPABLB-1P60509 514 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 CXADRP78310 365 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 SKOR1P84550 965 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 MYL5Q02045 173 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 UBXN1Q04323 297 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 RAD51Q06609 339 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 UGP2Q16851 508 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 ALG11Q2TAA5 492 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 C3orf38Q5JPI3 329 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 FAXCQ5TGI0 409 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 IGF2-ASQ6U949 168 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 CYP4V2Q6ZWL3 525 aaPredicted RBP10.14□□□□□ -0.79
GACAT3-201ENST00000426539 IRF2BP2Q7Z5L9 587 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 DNAAF5Q86Y56 855 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 LSMEM2Q8N112 164 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 CELF6Q96J87 481 aaKnown RBP10.14□□□□□ -0.79
GACAT3-201ENST00000426539 VCPIP1Q96JH7 1222 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 NSMCE3Q96MG7 304 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 PCMTD1Q96MG8 357 aaPredicted RBP10.14□□□□□ -0.79
GACAT3-201ENST00000426539 PEBP4Q96S96 227 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 LGMNQ99538 433 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 SLC39A8Q9C0K1 460 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 SUV39H2Q9H5I1 410 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 CATSPERBQ9H7T0 1116 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 CPNE5Q9HCH3 593 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 PCDH12Q9NPG4 1184 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 EVA1BQ9NVM1 165 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 NCKIPSDQ9NZQ3 722 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 UBA2Q9UBT2 640 aaPredicted RBP10.14□□□□□ -0.79
GACAT3-201ENST00000426539 RABGEF1Q9UJ41 708 aa10.14□□□□□ -0.79
GACAT3-201ENST00000426539 TEX51A0A1B0GUA7 166 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 NTN3O00634 580 aaPredicted RBP10.13□□□□□ -0.79
GACAT3-201ENST00000426539 FGF10O15520 208 aaPredicted RBP10.13□□□□□ -0.79
GACAT3-201ENST00000426539 ANXA6P08133 673 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 ATP1A3P13637 1013 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 C6P13671 934 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 PEX5P50542 639 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 PAPOLAP51003 745 aaKnown RBP10.13□□□□□ -0.79
GACAT3-201ENST00000426539 SUOXP51687 545 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 HK3P52790 923 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 AIF1P55008 147 aa10.13□□□□□ -0.79
GACAT3-201ENST00000426539 TPI1P60174 286 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms