RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 TLX3O43711 291 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 TULP3O75386 442 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 KAT7O95251 611 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 FKBP9O95302 570 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 CALCAP01258 141 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 KLKB1P03952 638 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 FUCA1P04066 466 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 SETSIPP0DME0 302 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 KRT5P13647 590 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 CD59P13987 128 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MTIF2P46199 727 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 LSSP48449 732 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 RGS7P49802 495 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MFAP3P55082 362 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MRPS21P82921 87 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 OCRLQ01968 901 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MVKQ03426 396 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 GFPT1Q06210 699 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 NFATC3Q12968 1075 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 DMC1Q14565 340 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 STILQ15468 1287 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 USP39Q53GS9 565 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 BSPRYQ5W0U4 402 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 PMF1Q6P1K2 205 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 GBP6Q6ZN66 633 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 TPGS1Q6ZTW0 290 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 FKBP9P1Q75LS8 142 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 NAXDQ8IW45 347 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 FAM114A1Q8IWE2 563 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 SIX6OS1Q8N1H7 587 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 GALNT15Q8N3T1 639 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MINDY1Q8N5J2 469 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 CCDC33Q8N5R6 958 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 OR2I1PQ8NGU4 316 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 RNF139Q8WU17 664 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 MED8Q96G25 268 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 SCYL1Q96KG9 808 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 HSFY1Q96LI6 401 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 FAM81BQ96LP2 452 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 GBP4Q96PP9 640 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 XPO6Q96QU8 1125 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ZSWIM1Q9BR11 485 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 CRACR2AQ9BSW2 395 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 BBS2Q9BXC9 721 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 NUP62CLQ9H1M0 184 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 THAP9Q9H5L6 903 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ABCC13Q9NSE7 274 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 RASAL2Q9UJF2 1139 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 CNTN6Q9UQ52 1028 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ZNF510Q9Y2H8 683 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 COA3Q9Y2R0 106 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ATMQ13315 3056 aa6.41□□□□□ -1.38
NIF3L1-207ENST00000426253 ZNF638Q14966 1978 aaKnown RBP6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 YJEFN3A6XGL0 299 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 NOTOA8MTQ0 251 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 E7ENQ6 273 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 NEDD8-MDP1E9PL57 170 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 M0QYV0 167 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 TRIM24O15164 1050 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 HOXC11O43248 304 aaPredicted RBP6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 STC2O76061 302 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 LETM1O95202 739 aaPredicted RBP6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 APBB3O95704 486 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 S100BP04271 92 aaPredicted RBP6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 CISD3P0C7P0 127 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 TYRP14679 529 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 BCKDHBP21953 392 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 FPR2P25090 351 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 PON1P27169 355 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 CHKAP35790 457 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 USP8P40818 1118 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 GPD2P43304 727 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 ZNF132P52740 706 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 DAOAP59103 153 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 KDSRQ06136 332 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 ADIGQ0VDE8 80 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 CCDC173Q0VFZ6 552 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 MESP2Q0VG99 397 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 FAPQ12884 760 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 EXOC3L4Q17RC7 722 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 DPCR1Q3MIW9 517 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 VWA3BQ502W6 1294 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 HSP90AA4PQ58FG1 418 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 GRAMD4Q6IC98 578 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 GJB7Q6PEY0 223 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 TRIM65Q6PJ69 517 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 ENOSF1Q7L5Y1 443 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 DENND1CQ8IV53 801 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 SFTPA1Q8IWL2 248 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 SCML4Q8N228 414 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 ALLCQ8N6M5 410 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 TXNDC5Q8NBS9 432 aaKnown RBP6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 TSTD1Q8NFU3 115 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 ZNF606Q8WXB4 792 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 IRGQQ8WZA9 623 aa6.4□□□□□ -1.38
NIF3L1-207ENST00000426253 GOLGA1Q92805 767 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms