RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ABHD17AQ96GS6 310 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 SLC45A3Q96JT2 553 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 KLHL32Q96NJ5 620 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 WRAP53Q9BUR4 548 aaKnown RBP14.34□□□□□ -0.11
HDAC6-206ENST00000426196 RDH14Q9HBH5 336 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 ARHGEF38Q9NXL2 777 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 RCOR1Q9UKL0 485 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 SNX10Q9Y5X0 201 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 HIVEP3Q5T1R4 2406 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 B4DGG1 531 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 ZW10O43264 779 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 DAB1O75553 588 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 F13A1P00488 732 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 ZSCAN22P10073 491 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 GNA15P30679 374 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 GEMIN4P57678 1058 aaKnown RBP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 SNRPD1P62314 119 aaKnown RBP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 AMZ1Q400G9 498 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 OGFOD3Q6PK18 319 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 C11orf57Q6ZUT1 292 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 ARHGEF19Q8IW93 802 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 RCBTB1Q8NDN9 531 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 KIAA1143Q96AT1 154 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 PDXPQ96GD0 296 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 WDR92Q96MX6 357 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 CPXM1Q96SM3 734 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 APOOQ9BUR5 198 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 GPN2Q9H9Y4 310 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-206ENST00000426196 PIGVQ9NUD9 493 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 DGKBQ9Y6T7 804 aa14.33□□□□□ -0.12
HDAC6-206ENST00000426196 IGLV3-10A0A075B6K4 115 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 NKX2-8O15522 239 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 RAD1O60671 282 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 VPS4BO75351 444 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 POP4O95707 220 aaKnown RBP14.32□□□□□ -0.12
HDAC6-206ENST00000426196 GSRP00390 522 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 KRT7P08729 469 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 FGF3P11487 239 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-206ENST00000426196 ETFBP38117 255 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 CXCR3P49682 368 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 ARSDP51689 593 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 GNA12Q03113 381 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 CDC20Q12834 499 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 CLPPQ16740 277 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-206ENST00000426196 ARHGAP44Q17R89 818 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 FAM183BPQ6ZVS7 135 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 TEX19Q8NA77 164 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 OR2AP1Q8NGE2 309 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 LMO3Q8TAP4 145 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 KIAA1524Q8TCG1 905 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 SSC4DQ8WTU2 575 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 ART4Q93070 314 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 PMEPA1Q969W9 287 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 C1orf74Q96LT6 269 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 CCDC74BQ96LY2 380 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 KREMEN1Q96MU8 473 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 EFHD1Q9BUP0 239 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 DDA1Q9BW61 102 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 DPEP2Q9H4A9 486 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 VPS4AQ9UN37 437 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 CNTN6Q9UQ52 1028 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 OR1A2Q9Y585 309 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 B3GALT1Q9Y5Z6 326 aa14.32□□□□□ -0.12
HDAC6-206ENST00000426196 IGHV5-10-1A0A0J9YXX1 117 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 CXorf51AA0A1B0GTR3 108 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 P4HA2O15460 535 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 DUX1O43812 170 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 SRGAP2O75044 1071 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 XPAP23025 273 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-206ENST00000426196 CSTF2P33240 577 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC6-206ENST00000426196 PRCPP42785 496 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 NDUFA8P51970 172 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 MLLT10P55197 1068 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 SNX16P57768 344 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 B4GALNT1Q00973 533 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 MC1RQ01726 317 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 DNM1Q05193 864 aaKnown RBP14.31□□□□□ -0.12
HDAC6-206ENST00000426196 LRRC63Q05C16 580 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 RAD51Q06609 339 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 TRA2AQ13595 282 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC6-206ENST00000426196 INPP5AQ14642 412 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 WSCD2Q2TBF2 565 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 DEFB109BQ30KR1 87 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 MYLK3Q32MK0 819 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 SPECC1LQ69YQ0 1117 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 ANKRD40Q6AI12 368 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 OLFML1Q6UWY5 402 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 GDPD4Q6W3E5 623 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 SLC26A9Q7LBE3 791 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 DRC7Q8IY82 874 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 AGBL5Q8NDL9 886 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 ARHGEF2Q92974 986 aaKnown RBP14.31□□□□□ -0.12
HDAC6-206ENST00000426196 NUDT22Q9BRQ3 303 aa14.31□□□□□ -0.12
HDAC6-206ENST00000426196 GTPBP4Q9BZE4 634 aaKnown RBP14.31□□□□□ -0.12
HDAC6-206ENST00000426196 ZYG11BQ9C0D3 744 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms