RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 PALMDQ9NP74 551 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 MAFBQ9Y5Q3 323 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ATP6AP2A0A1C7CYW4 349 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 FAM25AB3EWG3 89 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 FAM25CB3EWG5 89 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 FAM25GB3EWG6 89 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 PTGES3LE9PB15 166 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 MFSD11O43934 449 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 DUSP11O75319 330 aaKnown RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ATP6AP2O75787 350 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 STBD1O95210 358 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 SERPINB1P30740 379 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 CPSF6Q16630 551 aaKnown RBP eCLIP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ACTRT2Q8TDY3 377 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 OSCP1Q8WVF1 389 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ALG3Q92685 438 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 UGT2B28Q9BY64 529 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 SNX15Q9NRS6 342 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 AKAP7Q9P0M2 348 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 PDP2Q9P2J9 529 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ASF1AQ9Y294 204 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 AP4S1Q9Y587 144 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 PCDHA2Q9Y5H9 948 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 NPEPPSL1A6NEC2 478 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 TMEM191CA6NGB0 347 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 BTNL10A8MVZ5 291 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 E9PAM4 449 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 HTR1BP28222 390 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 NEDD8Q15843 81 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 GPAT3Q53EU6 434 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 PRSS55Q6UWB4 352 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 MACC1Q6ZN28 852 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 GCNT7Q6ZNI0 430 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 C10orf107Q8IVU9 208 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 SMG7Q92540 1137 aaKnown RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ERVK-5Q9HDB9 667 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 IMP3Q9NV31 184 aaKnown RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 XPR1Q9UBH6 696 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 EVLQ9UI08 416 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-207ENST00000426142 PCDHGA4Q9Y5G9 962 aa7.97□□□□□ -1.13
CTNND1-207ENST00000426142 ROBO3Q96MS0 1386 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 PTPRJQ12913 1337 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 A0A1W2PPM1 405 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 SCAMP1O15126 338 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 CLPTM1O96005 669 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 ATP5F1P24539 256 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 TLX1P31314 330 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 C1DQ13901 141 aaKnown RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 NRF1Q16656 503 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 BRMS1LQ5PSV4 323 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 FAM46CQ5VWP2 391 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 PMF1Q6P1K2 205 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 OR8H2Q8N162 312 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 PYROXD2Q8N2H3 581 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 NIFKQ9BYG3 293 aaKnown RBP7.96□□□□□ -1.13
CTNND1-207ENST00000426142 ARHGAP28Q9P2N2 729 aa7.96□□□□□ -1.13
CTNND1-207ENST00000426142 A0A0G2JLL6 359 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 GRM6O15303 877 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 OR10H2O60403 315 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 ULK1O75385 1050 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 FAM155BO75949 473 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 HLA-DQA2P01906 255 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 UGT2B4P06133 528 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 SLC35G4P0C7Q5 338 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 HOXB8P17481 243 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 PSMA3P25788 255 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 LCLAT1Q6UWP7 414 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 APTXQ7Z2E3 356 aaKnown RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 LRP10Q7Z4F1 713 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 PRRT2Q7Z6L0 340 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 ZNF276Q8N554 614 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 CCDC185Q8N715 623 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 SPPL2BQ8TCT7 592 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 SNRNP27Q8WVK2 155 aaKnown RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 RERGQ96A58 199 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 MCRS1Q96EZ8 462 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 SCLYQ96I15 445 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 BTN2A3PQ96KV6 586 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 CSPG4P5Q96PW8 444 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 SIKE1Q9BRV8 207 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 OSBPL6Q9BZF3 934 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 LHX5Q9H2C1 402 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 KCNK4Q9NYG8 393 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 LYVE1Q9Y5Y7 322 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 ZFP37Q9Y6Q3 630 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 TCRBV9S1A1TA0A576 114 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 SGTAO43765 313 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 ERAL1O75616 437 aaKnown RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 TKTP29401 623 aaKnown RBP7.96□□□□□ -1.14
CTNND1-207ENST00000426142 C21orf59P57076 290 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 FAM187BQ17R55 369 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 FUT10Q6P4F1 479 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 CHST9Q7L1S5 443 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 RASAL3Q86YV0 1011 aa7.96□□□□□ -1.14
CTNND1-207ENST00000426142 RAVER1Q8IY67 606 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms