RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FRMD8P1Q9BZ68 369 aaPredicted RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 IARS2Q9NSE4 1012 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 MTRRQ9UBK8 725 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CLRN2A0PK11 232 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TCP10L2B9ZVM9 353 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 RGS13O14921 159 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 BDNFP23560 247 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TTKP33981 857 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 OCA2Q04671 838 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 POU5F1BQ06416 359 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CYP51A1Q16850 503 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 VPS26BQ4G0F5 336 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CYBRD1Q53TN4 286 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CATSPEREQ5SY80 951 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 SPATC1Q76KD6 591 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 BPHLQ86WA6 291 aaPredicted RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 LRRC49Q8IUZ0 686 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 MMAAQ8IVH4 418 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TTC39CQ8N584 583 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 NDNFQ8TB73 568 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 UPF3AQ9H1J1 476 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ASNSD1Q9NWL6 643 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 MRPL11Q9Y3B7 192 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TCRBV3S1A0A5B6 114 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 DHRS12A0PJE2 317 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 KPNA7A9QM74 516 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TAF4O00268 1085 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 INMTO95050 263 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 HTR1BP28222 390 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 SHMT2P34897 504 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 GP5P40197 560 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 NUMBP49757 651 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 IST1P53990 364 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 GJA9P57773 515 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 VBP1P61758 197 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 LRP8Q14114 963 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CCDC58Q4VC31 144 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CERCAMQ5T4B2 595 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 AGAP7PQ5VUJ5 663 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 CNSTQ6PJW8 725 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ERMP1Q7Z2K6 904 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 GATAD2AQ86YP4 633 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ZCCHC7Q8N3Z6 543 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 FSTL5Q8N475 847 aaPredicted RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TNIP2Q8NFZ5 429 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 OR13F1Q8NGS4 319 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 PHF21BQ96EK2 531 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 HEXIM2Q96MH2 286 aaKnown RBP11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 XPR1Q9UBH6 696 aa11.37□□□□□ -0.59
SEC61A1-202ENST00000424880 TRIM24O15164 1050 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 KMOO15229 486 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 GPC4O75487 556 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 MFN2O95140 757 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 DLGAP3O95886 979 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 YWHAEP62258 255 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 GRM3Q14832 879 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 XAF1Q6GPH4 301 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 UGT3A1Q6NUS8 523 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 FAM183BPQ6ZVS7 135 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 R3HCC1LQ7Z5L2 792 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 GMCL1P1Q8NEA9 526 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 OR2T34Q8NGX1 318 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 DNAJB14Q8TBM8 379 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 FNIP1Q8TF40 1166 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF347Q96SE7 839 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 UGT2A1Q9Y4X1 527 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 RBBP6Q7Z6E9 1792 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 DLX3O60479 287 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 KPNA6O60684 536 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 AGXTP21549 392 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 ADSLP30566 484 aaPredicted RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 BCAT1P54687 386 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 SNRPFP62306 86 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 PLIN5Q00G26 463 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 TAP1Q03518 808 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 PLA2G4EQ3MJ16 856 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 STXBP5Q5T5C0 1151 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 KDELC2Q7Z4H8 507 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 ANKRD13BQ86YJ7 626 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 SLC22A15Q8IZD6 547 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 HS3ST5Q8IZT8 346 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 OR7G1Q8NGA0 311 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 ACMSDQ8TDX5 336 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 RNF19AQ9NV58 838 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 GDAP2Q9NXN4 497 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 PKD2L2Q9NZM6 624 aa11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 SUCOQ9UBS9 1254 aaKnown RBP11.36□□□□□ -0.59
SEC61A1-202ENST00000424880 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms