RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SERGEFQ9UGK8 458 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 MAD1L1Q9Y6D9 718 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.55□□□□□ -0.24
PRPF39-202ENST00000424478 ANXA9O76027 345 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 GLULP15104 373 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 DRD1P21728 446 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 ADRA1AP35348 466 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 GEMP55040 296 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 MORF4L2Q15014 288 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 SLC1A5Q15758 541 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 TRIM67Q6ZTA4 783 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 AAR2Q9Y312 384 aaKnown RBP13.55□□□□□ -0.24
PRPF39-202ENST00000424478 STARD13Q9Y3M8 1113 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 SPEGQ15772 3267 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 A0A1W2PQF6 199 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 PI15O43692 258 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 NTSR1P30989 418 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 TNFRSF4P43489 277 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 TMPRSS15P98073 1019 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 NSUN2Q08J23 767 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRPF39-202ENST00000424478 FZD5Q13467 585 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 HIF1AQ16665 826 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 ALG1LQ6GMV1 187 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 FBXO38Q6PIJ6 1188 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 UHRF1Q96T88 793 aaPredicted RBP13.55□□□□□ -0.24
PRPF39-202ENST00000424478 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 SLC8A2Q9UPR5 921 aa13.55□□□□□ -0.24
PRPF39-202ENST00000424478 CKAP5Q14008 2032 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 PRR23AA6NEV1 266 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 TRAFD1O14545 582 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-202ENST00000424478 TIMM44O43615 452 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 EPHB1P54762 984 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 NUDT18Q6ZVK8 323 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 TSPAN33Q86UF1 283 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 PIP4K2CQ8TBX8 421 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 TADA1Q96BN2 335 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 TRIB3Q96RU7 358 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 LRRC40Q9H9A6 602 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 CHRAC1Q9NRG0 131 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 ARL5AQ9Y689 179 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 EDDM13A0A1B0GTR0 161 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 GOLGA8KD6RF30 607 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 GOLGA8TH3BQL2 631 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 ELK3P41970 407 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 MPP3Q13368 585 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 GDPD4Q6W3E5 623 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 ARRDC3Q96B67 414 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 CEP44Q9C0F1 390 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 SEMA4AQ9H3S1 761 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 SUV39H2Q9H5I1 410 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 LRRC4CQ9HCJ2 640 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 BPIFA1Q9NP55 256 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
PRPF39-202ENST00000424478 KANSL1LA0AUZ9 987 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 MID1O15344 667 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 SYNCRIPO60506 623 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 POP4O95707 220 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 TNNT3P45378 269 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 RFLNAQ6ZTI6 216 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 ISG20Q96AZ6 181 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 HHIPQ96QV1 700 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 SLC17A6Q9P2U8 582 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 KNL1Q8NG31 2342 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 ACSL3O95573 720 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 GSRP00390 522 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 TPSB2P20231 275 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 SERPINA4P29622 427 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 AP1S1P61966 158 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 CUL1Q13616 776 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 TPSAB1Q15661 275 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 KYNUQ16719 465 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 WDR93Q6P2C0 686 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 PARS2Q7L3T8 475 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 ZCCHC9Q8N567 271 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 MRRFQ96E11 262 aaKnown RBP13.53□□□□□ -0.24
PRPF39-202ENST00000424478 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 GPR39O43194 453 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 PGLSO95336 258 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 SSTR1P30872 391 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 FAM193AP78312 1265 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 QPCTQ16769 361 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 ARMC12Q5T9G4 340 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 KDM7AQ6ZMT4 941 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 TTC7BQ86TV6 843 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 FRMD1Q8N878 549 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 HMGB4Q8WW32 186 aa13.53□□□□□ -0.24
PRPF39-202ENST00000424478 PIH1D2Q8WWB5 315 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms