RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SNX10Q9Y5X0 201 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 ZNF839A8K0R7 811 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 MEIS3P2A8K0S8 358 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 TADA2AO75478 443 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 AP2A1O95782 977 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 HSPA13P48723 471 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 CDK9P50750 372 aaKnown RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 TXNL4AP83876 142 aaKnown RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 PLOD1Q02809 727 aaPredicted RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 POU5F1BQ06416 359 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 NT5DC4Q86YG4 428 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 IFNLR1Q8IU57 520 aaPredicted RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 ERI1Q8IV48 349 aaKnown RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 RBM12BQ8IXT5 1001 aaKnown RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 FIBCD1Q8N539 461 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 NPWQ8N729 165 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 PPWD1Q96BP3 646 aaKnown RBP14.47□□□□□ -0.09
MSH5-206ENST00000423982 ASB9Q96DX5 294 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 RANBP9Q96S59 729 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 MCMBPQ9BTE3 642 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 OSBPL2Q9H1P3 480 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 IGSF9Q9P2J2 1179 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 CDC14AQ9UNH5 594 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 ZNF711Q9Y462 761 aa14.47□□□□□ -0.09
MSH5-206ENST00000423982 SAC3D1A6NKF1 404 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 SEC24DO94855 1032 aaPredicted RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 CLIC3O95833 236 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 AHSGP02765 367 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 NFKB1P19838 968 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 TKTP29401 623 aaKnown RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 MAGEA10P43363 369 aaPredicted RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 ADIGQ0VDE8 80 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 C16orf72Q14CZ0 275 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 FAM187BQ17R55 369 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 NOTUMQ6P988 496 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 HFE2Q6ZVN8 426 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 ZC3HC1Q86WB0 502 aaKnown RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 CLVS1Q8IUQ0 354 aaPredicted RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 RMND5BQ96G75 393 aaPredicted RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 DUS2Q9NX74 493 aaKnown RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 RRN3Q9NYV6 651 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 BCAP29Q9UHQ4 241 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 FAF1Q9UNN5 650 aaPredicted RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 MYRFQ9Y2G1 1151 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 TRPV2Q9Y5S1 764 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 FAM149AA5PLN7 773 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 M0QYT0 321 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 HTRA2O43464 458 aaPredicted RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 TIMM44O43615 452 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 NKX3-2P78367 333 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 ANO4Q32M45 955 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 LRRC8EQ6NSJ5 796 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 ELMSAN1Q6PJG2 1045 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 TXNDC5Q8NBS9 432 aaKnown RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 FNDC8Q8TC99 324 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 STYXQ8WUJ0 223 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 IL22Q9GZX6 179 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 PIGVQ9NUD9 493 aa14.46□□□□□ -0.09
MSH5-206ENST00000423982 CNOT6Q9ULM6 557 aaKnown RBP14.46□□□□□ -0.09
MSH5-206ENST00000423982 TARM1B6A8C7 271 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 EEF2KO00418 725 aaKnown RBP14.45□□□□□ -0.1
MSH5-206ENST00000423982 CLDN5O00501 218 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 CABYRO75952 493 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 BEST1O76090 585 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 DDHD2O94830 711 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 PLK1P53350 603 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 SULT2A1Q06520 285 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 AGKQ53H12 422 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 SLC27A1Q6PCB7 646 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 SETD3Q86TU7 594 aaPredicted RBP14.45□□□□□ -0.1
MSH5-206ENST00000423982 CNTD1Q8N815 330 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 HAUS8Q9BT25 410 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 CASS4Q9NQ75 786 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 CACNA2D2Q9NY47 1150 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 PADI4Q9UM07 663 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 ATP6AP2A0A1C7CYW4 349 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 TPST1O60507 370 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 SUPT3HO75486 399 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 ATP6AP2O75787 350 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 ERCC2P18074 760 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 TSPAN8P19075 237 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 KCNA5P22460 613 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 MATKP42679 507 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 PSMD7P51665 324 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 YBX1P67809 324 aaKnown RBP14.45□□□□□ -0.1
MSH5-206ENST00000423982 RHDQ02161 417 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 BST2Q10589 180 aaKnown RBP14.45□□□□□ -0.1
MSH5-206ENST00000423982 REP15Q6BDI9 236 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 CHSY3Q70JA7 882 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 MIPOL1Q8TD10 442 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 USP33Q8TEY7 942 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 IRGQQ8WZA9 623 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 LPPQ93052 612 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 LRCH3Q96II8 777 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 GPR22Q99680 433 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 CACNG4Q9UBN1 327 aa14.45□□□□□ -0.1
MSH5-206ENST00000423982 C9JVG2 144 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 H2AFYO75367 372 aaKnown RBP14.44□□□□□ -0.1
MSH5-206ENST00000423982 C8BP07358 591 aa14.44□□□□□ -0.1
MSH5-206ENST00000423982 SETSIPP0DME0 302 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms