RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CALN1Q9BXU9 219 aa18.01■□□□□ 0.47
SBDSP1-202ENST00000423945 ASPMQ8IZT6 3477 aa18.01■□□□□ 0.47
SBDSP1-202ENST00000423945 A6NNZ2 444 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 NEMP1O14524 444 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 TRAFD1O14545 582 aaPredicted RBP18■□□□□ 0.47
SBDSP1-202ENST00000423945 SDC3O75056 442 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 PRKCGP05129 697 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 ITGAVP06756 1048 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 IGFALSP35858 605 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 ARRB1P49407 418 aaPredicted RBP18■□□□□ 0.47
SBDSP1-202ENST00000423945 SEMG2Q02383 582 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 MESDQ14696 234 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 GRM3Q14832 879 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 UGP2Q16851 508 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 ANKRD20A8PQ5CZ79 823 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 PQLC3Q8N755 202 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 CENPTQ96BT3 561 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 ZNF641Q96N77 438 aaPredicted RBP18■□□□□ 0.47
SBDSP1-202ENST00000423945 WRAP53Q9BUR4 548 aaKnown RBP18■□□□□ 0.47
SBDSP1-202ENST00000423945 PCDH12Q9NPG4 1184 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 SEPT3Q9UH03 358 aa18■□□□□ 0.47
SBDSP1-202ENST00000423945 FAM221BA6H8Z2 402 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 RIOK3O14730 519 aaKnown RBP17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 TNFSF14O43557 240 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 TRIM16O95361 564 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 SGCGQ13326 291 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 FZD2Q14332 565 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 PAFAH1B3Q15102 231 aaKnown RBP17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 SLC25A45Q8N413 288 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 EID2Q8N6I1 236 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 TP53I13Q8NBR0 393 aaPredicted RBP17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 DENND6BQ8NEG7 585 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 RAPGEF5Q92565 580 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 ZNF670Q9BS34 389 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 MBNL1Q9NR56 388 aaKnown RBP17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 UCKL1Q9NWZ5 548 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 COQ6Q9Y2Z9 468 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 USP24Q9UPU5 2620 aa17.99■□□□□ 0.47
SBDSP1-202ENST00000423945 WDFY3Q8IZQ1 3526 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 MAP3K6O95382 1288 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 GIMD1P0DJR0 217 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 SERPINB6P35237 376 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 MMP12P39900 470 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 SCNN1BP51168 640 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 SUOXP51687 545 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 ZNF75DP51815 510 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 PFN3P60673 137 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 PDK2Q15119 407 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 TCEAL1Q15170 157 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 ZNF542PQ5EBM4 170 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 BRAT1Q6PJG6 821 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 ATPAF2Q8N5M1 289 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 FAM174AQ8TBP5 190 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 CXorf40AQ8TE69 158 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 RFFLQ8WZ73 363 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 GATA6Q92908 595 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 MGME1Q9BQP7 344 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 ATP13A3Q9H7F0 1226 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 LCMT1Q9UIC8 334 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 PNMA8BQ9ULN7 279 aaPredicted RBP17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 APOBEC2Q9Y235 224 aaKnown RBP17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 NEUROG3Q9Y4Z2 214 aa17.98■□□□□ 0.47
SBDSP1-202ENST00000423945 SPTY2D1-AS1A0A0U1RR47 76 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 C3orf70A6NLC5 250 aaPredicted RBP17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 C1QTNF9BB2RNN3 333 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 FPGTO14772 594 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 TM7SF2O76062 418 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 KRT7P08729 469 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 C1QTNF9P0C862 333 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 DGKAP23743 735 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 KDELR1P24390 212 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 SERPINA4P29622 427 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 RENBPP51606 427 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 MAXP61244 160 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 AP1S1P61966 158 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 BCL2L1Q07817 233 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 ELP6Q0PNE2 266 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 GALNT2Q10471 571 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 SLC10A2Q12908 348 aaPredicted RBP17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 RALGDSQ12967 914 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 ZNF235Q14590 738 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 INAVAQ3KP66 663 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 DCP2Q8IU60 420 aaKnown RBP17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 RHOT2Q8IXI1 618 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 TEX26Q8N6G2 289 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 LRRN4Q8WUT4 740 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 NUDCD1Q96RS6 583 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 FTSJ1Q9UET6 329 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 KLF15Q9UIH9 416 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 INTUQ9ULD6 942 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 ATP8A1Q9Y2Q0 1164 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 MSRB2Q9Y3D2 182 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 IGF2RP11717 2491 aa17.97■□□□□ 0.47
SBDSP1-202ENST00000423945 LRP4O75096 1905 aa17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 HTRA2O43464 458 aaPredicted RBP17.96■□□□□ 0.47
SBDSP1-202ENST00000423945 PIAS2O75928 621 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms